AMCG00017749 (LOC107702147,LOC107737977)


Basic Information

Item Value
gene id AMCG00017749
gene name LOC107702147,LOC107737977
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 20653145 ~ 20667672 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017749
ATGCAGTGCTTGAAGTCTCATGAACTGTTTGCATTGTTGCTCTTGGTAGAAGCTGCAGCAGGATGGCACGATTTGGATAACAGTGAGTACGACTGCTGGCCGTTAGAAAAACCCAACGTTTTTAACATGATAGATTGTGGAGGTCTGGAGATGGCTTGGGTGCACAGACCGCCAAGGAAAGTAGTCAGCGGAGAAGAGTTCAATGTGACCTATGCAGTCACCGCTTCTGACGAATTCTACCAGTGGGCTGTGATGAATGGCATATTCACCCACAGCAATGCAACAGCTGCCAAGAAGTTCTGTGAAGAGCACGAGTGTCCTCCAAACTGGAAAGATGCCAATGGGGAGAACTGCTGTGTTCATCATGCCAACATCCACTCATGCCCACTGGGATTCATGAAACATGTTAATGGTGGGATTTGTGGGCCATGGATTCCGGATGACGGGAGGATTTTTACTCACACCATCTCCACTGCCGGCCAAATGACCCAGACTAATTGGACTGCAAAGgtGGTTCTGATTCACGTGGGAGTCACTTCGCTGATTGCTCATATCCGGGTGGGAAATATGCAAGTTGCATTAGAAGCCAAGACCACAGTCTCACCAGCTGTAGTGTGTGGAGATGATGTCTGTGACAAGGACGAGACGTGCTCAACCTGCCCTGCGGACTGTGGCGAGTGCCCCATGACTGCGGCTATCAAGGTTGCCATTTGTCTCCCAATCACCTGTGTCTTTGTTGGCTTTATCCTTGTTGTGGTGTGGTTCCAGTATCAAAAGCAAAAGATGTTTTGGGATGAAAGCTGGATCATTGACTTCAGCCAGATCAAACATGACCAGGTGGCACGGACCACAATGGGCAGCATCATGAGTGTCCCCATGGCCAACAGTGACTCCAACACCAGCTGTGTAACTGCGCTCAGCTCCTGTACCGGAGCTCTCAACTCATCCCACAAACAGCACTTCACCCACACTGGAATATATGATGGTCACACAGttgctattaaaaaaattaagaagaaGACCTTTTCTCTTACAAAAACTATCAGAacagaggtaaaacaaataagAGAGCTAGATCACCCGAACCTGTGCAAGTTCTTTGGTGGCTGTCTGGAAGTGCCGAACGTGGCCATTGTAACCGAGTACTGTCCAAAAGGCAGCCTTAATGACGTCCTCCTCAATGAGGACATCCCTCTCAACTGGGGCTTCAGATTTTCCTTTGCCACTGACATTGCTAGAGGGATGTCATACCTTCACCAACACAAGATTTGCCATGGAAGGTTAAAGTCCATGAACTGTGTGATTGATGATCGCTGGGTTTGTAAAATCACAGATTATTGCCTGTCAACGTACAGGAAAGAAGACACAGATGAATTCCCCAGTTCATACCAGAAGAGACTGCAAGAGGTTTACATGCCACCAGAAGCTCTGTCTTCAAACCTTGAGCCCACACTGGCAGGGGATGTGTTCAGttaTTCCATCATATTACTGGAAATAGCCACTAGAAGTGACCCTGTCCCAGCTGAAGATAGTTCACTTGAATGTTCGTGGTGTCCTCCCCTGCCTGAGTTAATCACGGGTAAAGCAGAAAACACCTGCCCTTGTCCATCAGAGTATGTGGAGCTCATTAGGAGATGTCGGGCCCATAATGCTGCCCATCGACCTACATTTGAACAAATAAAGAAGTTTGTGTGTAGAATCAACCCCAACAAAGTCAGCCCAGTGGATATGATGATGAATCTGatGGAGAAATACAGCAAACATCTGGAAGTGCTAGTTGGTGAACGGACACAGGATCTGGTAGCTGACGATCTTAGACAAGGAAAGCCATTACAGGCTCAGAGCTATGTGAGTGCAACAGTGTTTTTCAGCGATATTGTGGGGTTCACACAGTTGTCGAGCACCAGCACACCATACCAGGTTGTCGAGTTCTTAAACAAACTCTACACAACGTTTGATGAAATCATAGACAATTATGATGTTTACAAAGTTGAGACTATTGGAGATGCATACATGGTTGTTTCTGGAGTTCCCAGGGAAAATGGAATACTCCACGCCAGTGAAATCGCCAGCATGGCTCTGGATCTGGTTGCTGTTTGTAAGACCTTCAGAATCCCacacaaacccaacacacaGCTACAGATCCGTGCTGGAATTCATTCGGGACCTGTTGTAGCAGGAGTGGTTGGGACTAAGATGCCCAGGTACTGTTTGTTTGGTGATACTGTGAACACAGCTTCAAGAATGGAATCCACCAGTGAAGCATTGAAAATTCAGTGCAGTTCTGGCACCTTTTATCTTTTGGAGGAGATTAGtggctacattttaaactgtcGTGGAATGCTTCAGGTGAAGGGAAAGGGTGATATGGTGACCTACTGGCTGGAGGGGAAGCAAACCATGCCCGTTAATAAGGAAATGGGAAAGAAATCCCCCGCTGTGGCAGAAAATGAGAAGGACCATTATACTTCCATCCCAGGGTTCCTCAGTAATGACCTTCACACCAATCCAGTCTAA

Function

NR:

description
PREDICTED: atrial natriuretic peptide receptor 1-like

GO:

id name namespace
GO:0035556 intracellular signal transduction biological_process
GO:0006468 protein phosphorylation biological_process
GO:0006182 cGMP biosynthetic process biological_process
GO:0016021 integral component of membrane cellular_component
GO:0005524 ATP binding molecular_function
GO:0004672 protein kinase activity molecular_function
GO:0004383 guanylate cyclase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017749 True 2517 mRNA 0.47 23 20653145 20667672

Neighbor

gene id symbol gene type direction distance location
AMCG00017737 ndufb6 coding downstream 25162 20626084 ~ 20627983 (-)
AMCG00017741 NA coding downstream 31040 20620406 ~ 20622105 (-)
AMCG00017733 NA coding downstream 36916 20603355 ~ 20616229 (-)
AMCG00017739 mtap,LOC107595051 coding downstream 51744 20595312 ~ 20601401 (-)
AMCG00017735 mtap coding downstream 68184 20571457 ~ 20584961 (-)
AMCG00017748 NA coding upstream 22549 20690221 ~ 20741395 (-)
AMCG00017751 NA coding upstream 80483 20748155 ~ 20774424 (-)
AMCG00017752 LOC107591574,LOC106602091,LOC107750449,LOC101068444 coding upstream 213821 20881493 ~ 20913956 (-)
AMCG00017753 NA coding upstream 461685 21129357 ~ 21136560 (-)
AMCG00017759 NA coding upstream 628375 21296047 ~ 21304123 (-)
G92800 NA non-coding downstream 18265 20634672 ~ 20634880 (-)
G92798 NA non-coding downstream 28725 20624143 ~ 20624420 (-)
G92714 NA non-coding downstream 237533 20415306 ~ 20415612 (-)
G92682 NA non-coding downstream 732993 19905992 ~ 19920152 (-)
G92660 NA non-coding downstream 785509 19867418 ~ 19867636 (-)
G92822 NA non-coding upstream 4393 20672065 ~ 20676278 (-)
G92823 NA non-coding upstream 8987 20676659 ~ 20734422 (-)
G92836 NA non-coding upstream 150003 20817675 ~ 20822960 (-)
G92838 NA non-coding upstream 152794 20820466 ~ 20821995 (-)
G92892 NA non-coding upstream 460799 21128471 ~ 21128999 (-)
AMCG00017725 NA other downstream 294520 20302000 ~ 20358625 (-)
G92591 nansa,LOC108416893,LOC108416857,LOC107723182 other downstream 1233789 19412987 ~ 19419356 (-)
G92436 NA other downstream 2189969 18462784 ~ 18463176 (-)
AMCG00017675 NA other downstream 2863396 17781648 ~ 17789749 (-)
AMCG00017665 NA other downstream 3165648 17468605 ~ 17487497 (-)
AMCG00017780 LOC101079287,LOC106577738,LOC100690429,LOC105925506,LOC108244244 other upstream 2650421 23318093 ~ 23321954 (-)
AMCG00017819 NA other upstream 3597007 24264679 ~ 24270595 (-)
AMCG00017839 NA other upstream 4278423 24946095 ~ 24949136 (-)
AMCG00017844 frmpd1b,frmpd1,LOC107750435,LOC107570223,LOC107655878 other upstream 4329872 24997544 ~ 25018212 (-)
AMCG00017861 LOC103354863 other upstream 5277469 25945141 ~ 25957648 (-)

Expression


Co-expression Network