AMCG00017751


Basic Information

Item Value
gene id AMCG00017751
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 20748155 ~ 20774424 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017751
ATGCTGACTGAGCCCAGGAAACTGCAGGAGAGCCCCGAGAGCAAAGTGGAGCGGCTGGGGCAGTTGTTCAAGCACAATGTCAGGAAGCTGCGAGAGAAGAGCCACAGCCTGGACCTGGTGTTCCTGGTGGATGAGTCATCCAGCGTGGGCAACACCAACTTCCTCAACGAGCTGAAATTTGTGAAGAAGCTCCTCTCTGATTTCCCCGTGTTGCCCTCTGCCACGCGAGTGGCCATTGTGACTTTTTCATCCAAGAACAATGTGGTGCCCAAGGTCGACTACATCTCCTCTCCTCAGTCCCACCAGCACAAGTGTTCCCTCTTCAACCAGGAGATCCCTGCCATCAAGTATCGGGGAGGTGGGACCTACACCAAAGGAGCCTTTCAGCAAGCTGCAcAAATATTGCGCCATTCACGCCAAAATGCAACAAAAGTAATATTCCTCATTACGGACGGCTATTCCAATGGCGGTGACCCCCGACCCACGGCAGCATCCCTGCGGGAGATGGGAGTGGAGATCTTCACATTTGGGATATGGCAGGGGAATATCCGGGAGCTCAACGACATGGCCTCCCACCCCAAGGAGGAACACTGCTACCTCGTACACAACTTCGCCGAATTTGAGGCTCTGGCTCGTAGAGCTCTGCACGAAGCTGGACAGGAGTGCTGCGACGTGATGGCCAGCTGTCAATGTGGCACCCACACTGGCCAATACGACTGCATTTGTGAGAAAGGGCACTATGGGAAAGGACTACAGCATGAATGCACAGAGGCCGAGGCAGCGGTGGTTGTAGCGGCTGTGCGGATGGGAGACCTTATCTCTGAGCAGCTGCCGACTTCCTGCCAGGCTGCACTCTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017751 True 858 mRNA 0.55 5 20748155 20774424

Neighbor

gene id symbol gene type direction distance location
AMCG00017748 NA coding downstream 6760 20690221 ~ 20741395 (-)
AMCG00017749 LOC107702147,LOC107737977 coding downstream 80483 20653145 ~ 20667672 (-)
AMCG00017737 ndufb6 coding downstream 120172 20626084 ~ 20627983 (-)
AMCG00017741 NA coding downstream 126050 20620406 ~ 20622105 (-)
AMCG00017733 NA coding downstream 131926 20603355 ~ 20616229 (-)
AMCG00017752 LOC107591574,LOC106602091,LOC107750449,LOC101068444 coding upstream 107069 20881493 ~ 20913956 (-)
AMCG00017753 NA coding upstream 354933 21129357 ~ 21136560 (-)
AMCG00017759 NA coding upstream 521623 21296047 ~ 21304123 (-)
AMCG00017758 ptprd,LOC106577623 coding upstream 542043 21316467 ~ 21369489 (-)
AMCG00017757 ptprd,LOC103370113 coding upstream 624877 21399301 ~ 21403260 (-)
G92823 NA non-coding downstream 13733 20676659 ~ 20734422 (-)
G92822 NA non-coding downstream 71877 20672065 ~ 20676278 (-)
G92800 NA non-coding downstream 113275 20634672 ~ 20634880 (-)
G92798 NA non-coding downstream 123735 20624143 ~ 20624420 (-)
G92714 NA non-coding downstream 332543 20415306 ~ 20415612 (-)
G92836 NA non-coding upstream 43251 20817675 ~ 20822960 (-)
G92838 NA non-coding upstream 46042 20820466 ~ 20821995 (-)
G92892 NA non-coding upstream 354047 21128471 ~ 21128999 (-)
G92943 NA non-coding upstream 1199560 21973984 ~ 21974289 (-)
G92947 NA non-coding upstream 1270556 22044980 ~ 22124742 (-)
AMCG00017725 NA other downstream 389530 20302000 ~ 20358625 (-)
G92591 nansa,LOC108416893,LOC108416857,LOC107723182 other downstream 1328799 19412987 ~ 19419356 (-)
G92436 NA other downstream 2284979 18462784 ~ 18463176 (-)
AMCG00017675 NA other downstream 2958406 17781648 ~ 17789749 (-)
AMCG00017665 NA other downstream 3260658 17468605 ~ 17487497 (-)
AMCG00017780 LOC101079287,LOC106577738,LOC100690429,LOC105925506,LOC108244244 other upstream 2543669 23318093 ~ 23321954 (-)
AMCG00017819 NA other upstream 3490255 24264679 ~ 24270595 (-)
AMCG00017839 NA other upstream 4171671 24946095 ~ 24949136 (-)
AMCG00017844 frmpd1b,frmpd1,LOC107750435,LOC107570223,LOC107655878 other upstream 4223120 24997544 ~ 25018212 (-)
AMCG00017861 LOC103354863 other upstream 5170717 25945141 ~ 25957648 (-)

Expression


Co-expression Network