AMCG00017753


Basic Information

Item Value
gene id AMCG00017753
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 21129357 ~ 21136560 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017753
ATGGCAAAAGAGAACAGGCTAGCAGCCAATCAGGGAGGGCCCGGGGCTGCCTATCGGATGTTTGATATAATGGAGGGCTTGATTGATAAACTCAAACTGTTGGATTTCGATGAACAGGTGGTTAGAAAGTACAACTTGCCAGCCATATCGAGGCATTACTTCGCCCTCCCGACAAACTGCGGTGAACAGTTCTCCATGTTCAACATGATCGCATTTTCAACCTGTCGGCCCTTCAAGCAGCCAGATGAATCTGATGACCCCAACGACACAGTGGCCAGCATCCAGGCAGAGCTGCGGGCCTTAGGTGGAAGAGTGGATTTCCCTCCTTCCaaactgaaggcaggatttggGGAGCACGTGTGCGATGTGTTGGCCCAGTTAGCAGATGAGGCCTTAAAAAGGACGAGATTCTGCTGGAAGGAGCCGAGCTACCCCACAGAGGAGCTGGAAGAGGAGTCTGTGACGGAGGACGACACAGAGGAACcggatgattatgaagatgaaaatCTGATAGACCTGGAAGCCCTGAAGGCCAGGACCAATCAGAGTACGCAACAGAATGGAGCTTGGAAGTGGAGCGAGTTCAGTTTCTCTATGCTGGGAGTAAGCATTCTGCATTTACCTTCCCAGGACTGGCGAATCCATGTGGACCTAATGAACGGACACAAAGAGGTCATTGAGTCCTCGTTGAAAGAGACCAAGgGTCACATCACAACCCTGCAAAAAGAAATCGTGAAGACACTAGGGAAATTGAGCAGCAGGGAGAAATTCCTGAACAATGAGCTGGAGCATTTAGTGACGGAATACCAGGCTGCTCAgcAAAGGAAGTGCGAGAGTGACAGAGCGGACCAGGGTGCTGGCGGAGTTCCTGTGCTGAAAATTAAGCAGAGCCTAGCTGAAGTCAAGAAAGAAATTCATAAGATGGACATGAGGATTGGACTGGCCCAGCAAATGCTAATGAAGATTCAGATGACCAGGGAAAGGCGTGCCACCTGGGAGAGATACCAGGGGAGGGCACAACCTCCCCGCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017753 True 1032 mRNA 0.51 10 21129357 21136560

Neighbor

gene id symbol gene type direction distance location
AMCG00017752 LOC107591574,LOC106602091,LOC107750449,LOC101068444 coding downstream 215401 20881493 ~ 20913956 (-)
AMCG00017751 NA coding downstream 354933 20748155 ~ 20774424 (-)
AMCG00017748 NA coding downstream 387962 20690221 ~ 20741395 (-)
AMCG00017749 LOC107702147,LOC107737977 coding downstream 461685 20653145 ~ 20667672 (-)
AMCG00017737 ndufb6 coding downstream 501374 20626084 ~ 20627983 (-)
AMCG00017759 NA coding upstream 159487 21296047 ~ 21304123 (-)
AMCG00017758 ptprd,LOC106577623 coding upstream 179907 21316467 ~ 21369489 (-)
AMCG00017757 ptprd,LOC103370113 coding upstream 262741 21399301 ~ 21403260 (-)
AMCG00017763 NA coding upstream 1172689 22309249 ~ 22366047 (-)
AMCG00017776 NA coding upstream 2033013 23169573 ~ 23194544 (-)
G92892 NA non-coding downstream 358 21128471 ~ 21128999 (-)
G92836 NA non-coding downstream 306397 20817675 ~ 20822960 (-)
G92838 NA non-coding downstream 307362 20820466 ~ 20821995 (-)
G92823 NA non-coding downstream 394935 20676659 ~ 20734422 (-)
G92822 NA non-coding downstream 453079 20672065 ~ 20676278 (-)
G92943 NA non-coding upstream 837424 21973984 ~ 21974289 (-)
G92947 NA non-coding upstream 908420 22044980 ~ 22124742 (-)
G92948 LOC107575789 non-coding upstream 956405 22092965 ~ 22093405 (-)
G92953 NA non-coding upstream 1015812 22152372 ~ 22152578 (-)
G92955 LOC101154678 non-coding upstream 1083961 22220521 ~ 22220780 (-)
AMCG00017725 NA other downstream 770732 20302000 ~ 20358625 (-)
G92591 nansa,LOC108416893,LOC108416857,LOC107723182 other downstream 1710001 19412987 ~ 19419356 (-)
G92436 NA other downstream 2666181 18462784 ~ 18463176 (-)
AMCG00017675 NA other downstream 3339608 17781648 ~ 17789749 (-)
AMCG00017665 NA other downstream 3641860 17468605 ~ 17487497 (-)
AMCG00017780 LOC101079287,LOC106577738,LOC100690429,LOC105925506,LOC108244244 other upstream 2181533 23318093 ~ 23321954 (-)
AMCG00017819 NA other upstream 3128119 24264679 ~ 24270595 (-)
AMCG00017839 NA other upstream 3809535 24946095 ~ 24949136 (-)
AMCG00017844 frmpd1b,frmpd1,LOC107750435,LOC107570223,LOC107655878 other upstream 3860984 24997544 ~ 25018212 (-)
AMCG00017861 LOC103354863 other upstream 4808581 25945141 ~ 25957648 (-)

Expression


Co-expression Network