Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00017762 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030131.1 |
| NCBI id | CM030131.1 |
| chromosome length | 33043351 |
| location | 22269271 ~ 22273356 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00017762 | True | 588 | mRNA | 0.52 | 2 | 22269271 | 22273356 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00017760 | NA | coding | upstream | 5753 | 22257375 ~ 22263518 (+) |
| AMCG00017761 | NA | coding | upstream | 15187 | 22156801 ~ 22254084 (+) |
| AMCG00017755 | NA | coding | upstream | 1227379 | 21007167 ~ 21041892 (+) |
| AMCG00017756 | LOC108411727,LOC106532529,LOC108241538 | coding | upstream | 1304170 | 20952325 ~ 20965101 (+) |
| AMCG00017754 | NA | coding | upstream | 1339661 | 20927025 ~ 20929610 (+) |
| AMCG00017767 | NA | coding | downstream | 288655 | 22562011 ~ 22562961 (+) |
| AMCG00017764 | NA | coding | downstream | 317437 | 22590793 ~ 22593980 (+) |
| AMCG00017769 | NA | coding | downstream | 322691 | 22596047 ~ 22596337 (+) |
| AMCG00017768 | NA | coding | downstream | 342566 | 22615922 ~ 22640911 (+) |
| AMCG00017765 | adgrl3 | coding | downstream | 387710 | 22661066 ~ 22668453 (+) |
| G92956 | NA | non-coding | upstream | 37379 | 22231457 ~ 22231892 (+) |
| G92954 | LOC101154678 | non-coding | upstream | 48492 | 22220524 ~ 22220779 (+) |
| G92952 | NA | non-coding | upstream | 116691 | 22152321 ~ 22152580 (+) |
| G92878 | NA | non-coding | upstream | 1140291 | 21128700 ~ 21128980 (+) |
| G92849 | NA | non-coding | upstream | 1384003 | 20883937 ~ 20885268 (+) |
| G93027 | NA | non-coding | downstream | 504372 | 22777728 ~ 22778103 (+) |
| G93039 | NA | non-coding | downstream | 604722 | 22878078 ~ 22878468 (+) |
| G93100 | cj011,LOC106577738 | non-coding | downstream | 1047095 | 23320451 ~ 23321055 (+) |
| G93101 | NA | non-coding | downstream | 1057134 | 23330490 ~ 23330720 (+) |
| G93102 | NA | non-coding | downstream | 1057378 | 23330734 ~ 23330972 (+) |
| AMCG00017745 | NA | other | upstream | 1418654 | 20848356 ~ 20850617 (+) |
| AMCG00017747 | NA | other | upstream | 1447223 | 20799595 ~ 20822048 (+) |
| AMCG00017730 | ppp3ca,LOC107084148,LOC106922390,LOC106958666,LOC102788851 | other | upstream | 2266142 | 19993085 ~ 20003129 (+) |
| AMCG00017712 | NA | other | upstream | 2740978 | 19444172 ~ 19528293 (+) |
| AMCG00017710 | nans,LOC108241509,LOC103384124,LOC107390934,LOC107390917 | other | upstream | 2836168 | 19396028 ~ 19433103 (+) |
| AMCG00017783 | NA | other | downstream | 1028259 | 23301615 ~ 23329569 (+) |
| AMCG00017817 | phox2b,LOC101065912,LOC106604546 | other | downstream | 1835204 | 24108560 ~ 24112110 (+) |
| AMCG00017829 | smim14,LOC107700293,LOC107757606 | other | downstream | 2431914 | 24705270 ~ 24715730 (+) |
| AMCG00017843 | NA | other | downstream | 2776953 | 25050309 ~ 25052374 (+) |
| AMCG00017886 | NA | other | downstream | 4719535 | 26992891 ~ 26997452 (+) |
