AMCG00017763


Basic Information

Item Value
gene id AMCG00017763
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 22309249 ~ 22366047 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017763
AGTCTGGGAGGGTGACCAGTGCAGAGGTCGCTGTTGCTGCACATGTCTGCGGAGGATCGGGTTACAGTGCAGCCCATCACTCTGTGCGCCGTTAGCGACAGGGCAACACCGCATACGAAACGTCCTGCACTGCGAGGCCAGGCAGGAAATCACCCGGCGTGTAtGTCTAAGTAAAGAAGGCATTCTTAATTGACTGGGCTGCTTTACTTCTCTTTGAAAATGATTGAAACTATTGACACCCAGCGTGCTTTGCAAGCGGTGGAGCGCCTTCAGGCCAAGCTTAAGGAGCGAGGCGATGTCCCCAGTGAGGAGAAACTGAACTTGCTAAAGACAGTCCTACAGAGCCCCCTGTTTCACCAGATCCTCAACCTTCAGACCTCTGTACAACAGCTTAAAGAACAGGTGAATGCAgtgccagtgtcagtgtctctTCATAACGAACTCTCCCAATCAATCAACCCTGGCCTTTGCTCTCTTCCGTTGAGCGAGTCCTATGTGTTGGCACAGCAGAATGGCAGTCTTGGCATGCAGGGAGATTCCCCAGTGGTTCCAGTTTCCCCACAGATAAATGGTAAACCATCAGCTGATGAGTTTGAGCACATCATTCGGTCAATGGCCCAGGGCCGGTATGTAATGCACATTGAACTTGAGAAGCCACTCTCTGGTGGGCTGGGGTTCAGTGTAGTGGGCCTAAAGAGTGAAAACAGAGGGGAACTGGGCATTTTTGTTCAGGAGATCCAGCTGGGCAAGGCTGATCAGATCTTATCCATCAACGGACAACCACTTGACCAGACCATTACTCATCAACAAGCTATCAGCATCCTCCAGAAAGCCTCAGAGAAGGTCGATCTCATTATTGCAAGAGGCCCTATTCCACAGCTGGCCAGTCCAGTGGTCTCCAGGACACCTTCTGCAGCCAGCACTCTGTCAGCCCACTCCAGCGCGACACACTGGCAGCATATGGAAACAATTGAGCTGGTGAATGATGGGACAGGTTTGGGATTTGGAATAGTGGGAGGAAAGACCACTGGTGTCATTGTGAAAACCATCCTGCCTGGTGGAGTGGCAGATCAGGATGGCCATCTGCACAGTGGAGATCATATTCTGAAGATTGGTGACACTGACCTGCATGGCATGGGCAGTGAGCAGGTGGCCCAAGTGCTCCGGCAGTGTGGCAACAGAGTGAAACTGGTCATTACAAGAGGAGCCATGGAGGAGTCCTCGTCCGGCCCACCTCCACCAGTGCTAGCTCCTGTAGCAGAGCAGCAGGGTGAACTGACAGATGATGAAGAGGATGATCTTGATGCATTTGATGTGGAGCTGACCAAAAATGCACAGGGTTTAGGAATTACTATTGCTGGCTATGTGGACAGGACAAATATTCAGGGCTTCACTAACCAACAAGCAGTGGAGGTCCTGAGACACACCGGGCAGACAGTGCATCTGACTCTCATCAGGAGAGGGTTCACAGCCGAGGAGCAGCTCATTTCAGAGCTCAGGCCGCCGCCCGCAGATGTTAACGAGCTGGATGTAGATAGAATAGATTCAGACACTACCACAGAGGATCTAGACAGAATCCAGACACTGCACCCGTCCCTGTGTGGAGGTTCGAATTTGACTCCTGTCGAGGATGAACAACTGCACCCTGAAGGAGGAACACAGCAGACAACAGTAGATGAAGAGGAGCTGAAGAAAAAATGGGAGTCTGAGCTTGGTCCTAGCAATGAAGTAGTGATTGCTCAAGTTCAAAAGTTCAGTGAAAGCAGTGGACTTGGCATTAGCCTGGAAGCATCCACTGGGCACCATTACATACGCTCAATCCTGCCAGAGGGACCAGTTGGACGCAGTGGCAAGCTGTTCAGTGGAGATGAACTGCTTGAGGTTAACGGAATATCTTTACTTGGCGAAACTCACAAGGAGGTTGTTAGTATTTTAAAGGAGCTACCTCTCTGTGTGACCCTGGTGTGCTGTCGTCCAGCCTTGCCCTTTCAAAGTGACTGTGATATTACCACACACCACCTTCCAGAACAATGTGCTGAACCAGTTGAGAAGGTCCATGTAGACATTGATGAGTGTGTTGCTTCTTTTGAAACGGATGACCctgtaaaaaacaatGACCCCGTTGACCCAGTAAAAACAGTGATAGTGATCCGCTCCCTGGTGCCCGATGGTGTTGCAGAACTGGACGGCCGTCTGCTTCCCGGGGACCGGCTCATGTTTGTCAACGATACAAACCTGGAAAATGCGAGTCTGGAGGATGCAGTGCAGGCGCTGAAGGGGGCAGCGATTGGAATAGTCAGAATTGGAGTGGCCAAGCCCTTACCTCTCACCCCAGAGGAGGGCAATTCTTCTTCTAAGGATGAGTCCGTCTTCTACACTGCTCAGCAGtttgaggaggaggagcctgCTGATGCTGCAGTTTTCCATGCAGAACTAGCACTGATTGACTCAAACGAAGCAGACATGACTGACAAGACGTTTGATTCTCAGTACCTAGGGGAAGAAGACGACACATTTCAAGCCTCCATGTTAGCGTTGCATGGCAGTACATGCAGTGTGGATCTGGATTACCAGCTTTCAGTGCAGTCGTCTACACCCAAGACTTCCCATGAAGAAGCATTTGCAAATCCCTCATTTTCAGCAGTGTCTGAATTTGCTGATGAATCAGAGCCATTTTTCCCTGAAGAGAAACCAATCACTCTTTCCCAACCATGGACTGCTTCAAGTTCAACGTTACCAGATCGAGCTGCTAACAAAGATCTGTCTCTTGAGCAGCACTTAAGTATATTGGAGAGAGAGCATGTAATGCCAGAGATTGTACAATCCGAACCAAGTTCAGGTTTTAACCATGAGAGAAAGCCTGTGCAGTCTTTTGAGACACCGATGGAATTGGACAAGGCAGCTGATGCCTGTGCAAACTATAAGTCCAGCCATGAAGGCAGTGTGGCCACAGATCCAATCAAAGGTGATATAGATGATAGATCATCTCATCATGAAGGCTTTGCAGCTGTAAAGGATGAAGAACATTGTGTGGATCAAGGACCTGAGGAGAAGGTTGATAAAGAAATGTTCACACCTGGAAGCAGTTTTGAGAGGACAATCACTGTTGTCAAGGGCAACTCTAGTCTTGGAATGACTGTGAGTGCTGTTAAGGATGGCTCAGGAATGATTATTCGCAGTATCATTCATGGTGGATCCATCAGCCGAGATGGACGACTTGGTGTAGGAGACTGCATCTTAGCTATCAATGGGGAGCCAACTACTAATCTAACCAATGCACAGGCTCGTGCCATGCTGAGAAGACACTCCCTCATTGGGCCCGATATAAGTATCACCTATGTTCCTGCTGAATATCTGGAAGAATACAGGAGCAGCTTGGGTCACCAGAAGGATGAAACTATATCTGTTGAAGGAGCTCCTTCAACATGTGGGGAGTTCCCTGAGCTTCCTGAGCGAGAAGATGGGGAAGGAGAAGAGAGTGAGCTACAGAGTGCTGCCTACAACAACTGGAACCAGCCGAGGAAagTAGAGCTATTTCGGGAGCCTGGTAAATCTCTTGGCATCAGTATTGTTGGCGGCAGGGGAATGGGCAGCCGGCTCAGCAACGGAGAGGTGATGAGAGGGATCTTCATCAAGCACATTCTGGAGGACAGCCCTGCGGGAAAAAATGGcacactgaaaacaggagacagaaTAGTGGAGGTGGATGGAAATGATTTACGGGACGCCAGCCATGAGCAGGCAGTCGAGGCCATCCGCAAGGCCAGAAATCCTGTGGTGTTTATGGTCCAGAGCATCGTGCACAGACCCAGAGCACCACCAAACAGATTGGATATGGATACAGGCAAGACATCTCCTCCTGTCCCCACACTGCCTCCTCTCCCAATGGTGCCTTACGCTGGTGAGACAGATACGGACGCACTGCCAGAGCCCCCAGAGAGGCCTGCCTCGCTGCCACAGTctccagaggaggaggaggatgaattTGGCTATAGCTGGAAAAAGATCATACAGCGCTATGGGAGCTTGCCAGGGGAGTTACACATGATTGAGCTGGAGAAAGGGAAAACTGGGCTGGGTCTCAGCCTGGCTGGCAACAAGGACCGCTCCAGAATGAGTGTGTTTGTAGTGGGAATTGACCCGTGCGGTGCTGCTGGGAAGGACAAACGGATCATTGTTGGAGACGAATTACTAGAAATAAATGGCCAGATTTTGTATGGCCGTAGTCATCAGAATGCTTCCTCCATTATCAAAAGTGCCCCCTCTAAAGTGAAAATCATTTTCATCAGgaacacagacGCCCTGGACCAGATGGCTGTGGGTCCAGTGAAAGAAAGTGGAGACATGCTAGAATCACAGACTGAGGACCAAGGGGGTCTGGGTATTGCCATCAGTGAGGAGGATACCAAGGGCGGTGTGGTGATTAAGAGTTTAACCGAGCATGGTGCAGCAGGACAGGATGGCAAAATTAAAGTTGGAGACAAAATCTTGGCAGTGGATGATGAAAGTGTTGTGGGATGTCAAGTGGAGAAGgTTATTAATTTGCTTAAAAAGGCAAAGAGTACTGTGAAGCTGACAGTTTGCTCAGAAGATCTGCTATCTCATATATCCTGTGCAAATCTCCCAGAGAGTGTCTGTGATGTAAAGATAGCCAATCCCACCACATCAACATCCATTACTGTTGGGGCCCCAGATACAGAGCCATTTAAAActtCAAGTAGATCATCTACTCCAGTGACTATGGCATCAGACCCCATCACCTGCCCCATCATACCTGGGTGTGAGACCACTATTGACATCTCCAAGGGACGGACTGGGCTTGGGCTGAGCATTGTGGGAGGATCTGACACACTCTTGGTTAATGGAATTGACTTAAGAATTGCCACTCACGATGAGGCAATCAATGTCTTGAGACAAACTCCCCAAAGAGTGCGTCTGACAGTATACAGGGATGAGGCCCAGTACAAGGAGGAAGACATGTGGGATGTGTTCTTTGTGGAGCTACAAAAGAAGCCTGGAGAAGGATTAGGCCTCAGTATTGTTGGAAAAAGGAATGACACTGGGGTCTTTGTGTCAGATATCGTGAGAGGAGGGATAGCGGACACAGATGGTAGACTCATGCAAGGAGACCAGCTTCTGTCTGTGAATGGGGAAGATGTTCGCTCGGCAACACAAGAATCTGTCGCTGCTTTATTAAAgTGTTGCATTGGACCAATAAATCTAGAACTTGGCAGGTTTAAAGCTGGACCTTTTCATTCAGAGAGGCGATTATCACACAGCAGCCAGGTCAGTGAAACAGGGAGCTCTGGAGCAGAATCGTTCACTTTGTCTGGGTCTGGTTGTGTCTTGGGGGATGACATTGAAATATCCGACTTTCAAGAGCTCAGAACAGTTGAGTTTACAaaggaGCCTGCAGACTCTCTGGGAATCAGTATTGCTGGTGGAGTAGGAAGCCCTCTTGGAGATGTCCCAATATTTATTGCCATGATGCACCCCACTGGACTGGCAGCACAGACTCAGAAACTAAAAATTGGAGATCGTATTGTGAGCATTTGTGGGACATCTACTGAGGACATGAGCCACTCCCAGGCTGTCACCTTGTTAAAAAATGCCTCAGGGACAATTGAGTTACAGGTGATTGCAGGAGGTGATGCAAGCGTGACCGGTCCTTTTCAAGACAACGCGGCCGCCAGCCTATCACTGTCAGGGCTGACAGCAAGCAGTATTTTTCACGATGACCTCGGGCCTCCTCAATACAAGACTATTACACTTGACAGAGGGCCTGACGGTCTGGGCTTCAGCATTGTTGGAGGATTTGGCAGCCCACACGGAGACCTCCCCATTTATGTTAAGACGGTGTTTGTCAAGGGGGCAGCTTCTGAAGATGGCCGTCTGAAGCGTGGAGACCAGATTATAGCTGTGAATGGACAGAGTCTGGAAGGAGTCACCCATGAAGAGGCAGTGGCTATTTTGAAAAGGACGAAAGGCACCGTGACTCTCACTGTACTTTCATAAATGTTAATTCACTGGATTAGtttaatacttttgtttttctgcaattGTAGCAATGAGCactgtgattattttatgtGACCTTGCTGTAACCCAGAAACCTTCCATACAATGCGTTCACAAATGGGTACAAAATGTTGTTTACTTTTATGAAGCCCACAGATGATGGCAGTGAGGAGAATGTTTCTTAAGCATAACAGGTTGCTTAGCTATAAAGACACTCACTGATCATAGTAATCCGAGGAGTGCCCACAAAAAGAACAACCCTCAGTGAAGatcatgttttaaattcatgcatacattttatGCAATTATTTGAAAGTCCTCAAAGCCCATTTGTTTAACTCTTTATAGACAatcatgctttcatttttttattaagtgcACCTGCTGCACTTGAGTGTGTTCTATACTTTTATCTCTAAAGCATGTACAATATTGAAAAATCTTTTCTCCATCGATTGCAGACACACTCTGAATGATAAACGctcaatttcaattttgttaGGGTCCCATTTGATGCTACCTTCTTCTGACATACACAATAGTTATGTGGTCTCAATTTAGTGTCCCTGAGAGTATTGTCAAAAGACAAACAGCATGTATTGTTGCAGAAggtattattttaagatttttttcatctttatgtAACAGGGGCCCAGGTGACAAATAGACGGTGTCAGTGTTTATTCCAAATGCTCAATATATTTACTAATACTATCTTAAAATTCTAGAAACAGCATAtgacatttctaaataattgGCAAATGAGGGGTGCACTACTTACCATAAGGTTTTTAATGTTGAATGAGTGTCTATGGACCCCATTGCTGGATTcatggttgttttgtttttgtgtagaaaacaatatatatatatatattggctgaatgtatatatatttttaaactaattatCTAGCAGCTCTGTTAGATAGGGTACCACTAACATGCAGGAATGTTATGATGCTGTAATTAATTTCTGATTAGTGGAAATGTGAGGGATCACGAAAAACTGCTAATAAATACTACGATGTTTGTAAATTccccaaaatacattaaacctCTATAACATTGTCTTATTGCTGTTGAGTTcatgaaaaacaatgtgtaaCTTTTGCTGTTCATAGAACAATTGTGATACGCCGAGGTGTCTTGTTTTCCGTGGCGTTTGTTATTCTGTTAGAACCAGTTTTTAGTATTGATACACGAATTTCAGCTGTATGATGACTAATCAAATAAATCACTTACTATAAGattaataaacatattgtaTCAGAGTGGACATTATGGAGACGAATTGGTGAAGTATGTTGAAAGAATAATGAAAAGGCATAGCACTCAGGGAAGAGTTAAAAGAAGGATAGTAGTTTAAGATAGATTACTAGTAAGGTGTATGCTAGTGCCGATGCATGTTCCAGTGACCTGTTGTTCTGCGGTACGTCTTGTTTTCATCCGTTTTCTCAGTTGGAGAAAAGTtgttaatgtataatattaagGTGCGATGCTCCCCCTAAtgtgtaatgcttttaaaacattatatggCTGGTGGtagtattataatttttcatatgtgtatttcaaatatgtgttttccttttctcctttcCTCAATGTAAGTATCTTTTTCAGTATCGTTAATTAATGATCCTGTCATTTCTCTCCAACTGAATAAATGAAAGTGACCTTCCAGTGACTGATGTTGGTTCTCAAGTTCAATTATATGGatagcaaagaaaaacagaaggcCTGGGATAATAGGCATTATGGAAAATAGGAATTTCTTCtctgagcaaaataaatacatttccagacCAACTAAGTTTCAGTAGTTTAAAggttaaacaaacagaaactaaTGGACTGTGtgatatttaagaaaaacacttgGC

Function

GO: NA

KEGG:

id description
K06095 MPDZ, MUPP1, Patj; multiple PDZ domain protein

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017763 True 7903 mRNA 0.46 43 22309249 22366047

Neighbor

gene id symbol gene type direction distance location
AMCG00017757 ptprd,LOC103370113 coding downstream 905989 21399301 ~ 21403260 (-)
AMCG00017758 ptprd,LOC106577623 coding downstream 939760 21316467 ~ 21369489 (-)
AMCG00017759 NA coding downstream 1005126 21296047 ~ 21304123 (-)
AMCG00017753 NA coding downstream 1172689 21129357 ~ 21136560 (-)
AMCG00017752 LOC107591574,LOC106602091,LOC107750449,LOC101068444 coding downstream 1395293 20881493 ~ 20913956 (-)
AMCG00017776 NA coding upstream 803526 23169573 ~ 23194544 (-)
AMCG00017777 gtf2e2,LOC107671915,LOC107548363 coding upstream 897987 23264034 ~ 23279042 (-)
AMCG00017782 aco1 coding upstream 930641 23296688 ~ 23313459 (-)
AMCG00017781 acer2,LOC107691831,LOC107675399,LOC107601172,LOC107559953 coding upstream 964897 23330944 ~ 23345917 (-)
AMCG00017787 NA coding upstream 989559 23355606 ~ 23388495 (-)
G92972 NA non-coding downstream 34272 22272981 ~ 22274977 (-)
G92955 LOC101154678 non-coding downstream 88469 22220521 ~ 22220780 (-)
G92953 NA non-coding downstream 156671 22152372 ~ 22152578 (-)
G92947 NA non-coding downstream 184507 22044980 ~ 22124742 (-)
G92948 LOC107575789 non-coding downstream 215844 22092965 ~ 22093405 (-)
G93024 NA non-coding upstream 320377 22686424 ~ 22689677 (-)
G93026 NA non-coding upstream 324628 22690675 ~ 22691532 (-)
G93028 NA non-coding upstream 411757 22777804 ~ 22778099 (-)
G93033 NA non-coding upstream 435324 22801371 ~ 22804384 (-)
G93038 NA non-coding upstream 473104 22839151 ~ 22839434 (-)
AMCG00017725 NA other downstream 1950624 20302000 ~ 20358625 (-)
G92591 nansa,LOC108416893,LOC108416857,LOC107723182 other downstream 2889893 19412987 ~ 19419356 (-)
G92436 NA other downstream 3846073 18462784 ~ 18463176 (-)
AMCG00017675 NA other downstream 4519500 17781648 ~ 17789749 (-)
AMCG00017665 NA other downstream 4821752 17468605 ~ 17487497 (-)
AMCG00017780 LOC101079287,LOC106577738,LOC100690429,LOC105925506,LOC108244244 other upstream 952046 23318093 ~ 23321954 (-)
AMCG00017819 NA other upstream 1898632 24264679 ~ 24270595 (-)
AMCG00017839 NA other upstream 2580048 24946095 ~ 24949136 (-)
AMCG00017844 frmpd1b,frmpd1,LOC107750435,LOC107570223,LOC107655878 other upstream 2631497 24997544 ~ 25018212 (-)
AMCG00017861 LOC103354863 other upstream 3579094 25945141 ~ 25957648 (-)

Expression


Co-expression Network