AMCG00017765 (adgrl3)


Basic Information

Item Value
gene id AMCG00017765
gene name adgrl3
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 22661066 ~ 22668453 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017765
ATCTTGGGTTATAGGTGCGATTGCACTGCTCTGTCTTCTTGGACTGACCTGGGCCTTTGGACTGATGTACATTAATGAAAGCACGGTCATCATGGCCTACCTCTTCACGATATTCAACTCACTTCAaggaatgtttattttcattttccactgtGTCCTTCAAAAGAAGGTGCGTAAGGAGTATGGGAAGTGTCTGCGCACTCACTGCTGCAGTGGGAAGAGTGTGGAGACCTCTATTGGCTCAGGGAAGGGGTCTGCTTCCAGGACACCGGGACGGTATTCCACTGGCTCACAGAGCCGAATCCGTAGGATGTGGAATGACACCGTCAGGAAACAGTCCGAGTCTTCCTTCATCACGGGCGACATAAACAGCTCAGCATCACTGAAC

Function

symbol description
adgrl3 Enables calcium ion binding activity. Involved in cell-cell adhesion via plasma-membrane adhesion molecules. Is integral component of plasma membrane.

NR:

description
PREDICTED: latrophilin-3 isoform X18

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017765 True 388 mRNA 0.50 3 22661066 22668453

Neighbor

gene id symbol gene type direction distance location
AMCG00017768 NA coding upstream 20155 22615922 ~ 22640911 (+)
AMCG00017769 NA coding upstream 64729 22596047 ~ 22596337 (+)
AMCG00017764 NA coding upstream 67086 22590793 ~ 22593980 (+)
AMCG00017767 NA coding upstream 98105 22562011 ~ 22562961 (+)
AMCG00017762 NA coding upstream 387710 22269271 ~ 22273356 (+)
AMCG00017766 NA coding downstream 18105 22686558 ~ 22687322 (+)
AMCG00017772 NA coding downstream 338570 23007023 ~ 23020463 (+)
AMCG00017774 NA coding downstream 433509 23101962 ~ 23129457 (+)
AMCG00017773 LOC106577627,LOC106944166,LOC103146371 coding downstream 475019 23143472 ~ 23152780 (+)
AMCG00017779 NA coding downstream 497894 23166347 ~ 23168345 (+)
G92956 NA non-coding upstream 429174 22231457 ~ 22231892 (+)
G92954 LOC101154678 non-coding upstream 440287 22220524 ~ 22220779 (+)
G92952 NA non-coding upstream 508486 22152321 ~ 22152580 (+)
G92878 NA non-coding upstream 1532086 21128700 ~ 21128980 (+)
G92849 NA non-coding upstream 1775798 20883937 ~ 20885268 (+)
G93027 NA non-coding downstream 109275 22777728 ~ 22778103 (+)
G93039 NA non-coding downstream 209625 22878078 ~ 22878468 (+)
G93100 cj011,LOC106577738 non-coding downstream 651998 23320451 ~ 23321055 (+)
G93101 NA non-coding downstream 662037 23330490 ~ 23330720 (+)
G93102 NA non-coding downstream 662281 23330734 ~ 23330972 (+)
AMCG00017745 NA other upstream 1810449 20848356 ~ 20850617 (+)
AMCG00017747 NA other upstream 1839018 20799595 ~ 20822048 (+)
AMCG00017730 ppp3ca,LOC107084148,LOC106922390,LOC106958666,LOC102788851 other upstream 2657937 19993085 ~ 20003129 (+)
AMCG00017712 NA other upstream 3132773 19444172 ~ 19528293 (+)
AMCG00017710 nans,LOC108241509,LOC103384124,LOC107390934,LOC107390917 other upstream 3227963 19396028 ~ 19433103 (+)
AMCG00017783 NA other downstream 633162 23301615 ~ 23329569 (+)
AMCG00017817 phox2b,LOC101065912,LOC106604546 other downstream 1440107 24108560 ~ 24112110 (+)
AMCG00017829 smim14,LOC107700293,LOC107757606 other downstream 2036817 24705270 ~ 24715730 (+)
AMCG00017843 NA other downstream 2381856 25050309 ~ 25052374 (+)
AMCG00017886 NA other downstream 4324438 26992891 ~ 26997452 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location