AMCG00017768


Basic Information

Item Value
gene id AMCG00017768
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 22615922 ~ 22640911 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017768
ATGGTAGAGACCGTTAACAACCTCCTTCAGCCCCAAGCCCAGGCAGCCTGGAAAGACCTGACAGCCAGTGACCAGCTGCGGGCCGCTACCATGCTTTTGGACACTGTGGAAGAGGGTGCCTTTGTCCTAGCAGACAACCTGCTCAAGACCGACATCGTGCAAGAAAATACAGAGAACATCCGTGAGATCAGAATGGCCTTTGTTCTCTACAAACACCTGGGCGCCTACCTCTCCACAGAGAATGCCAGCATGAAGTTAGGAAGTGAGGCCATTTCTACCAACTACTCCGTCATTGTCAACTCGCCAGTAATCACCGCTGCCATTAACAAGGAGAGCAACAAAGTCTACCTGTCAGACCCCGTGATCTTCACTGTCAAGCACCTGCAGCAATCTGAAGAAAATTTCAACCCCAACTGCTCTTTCTGGAGTTATTCTAAGCGTACCATGACTGGATACTGGTCAACCCAAGACTGCCGGCTGCTGGGGACAAACAGGACGCACACGACCTGCTCTTGTACACACCTCACCAATTTTGCGGTTCTGATGGCACATGTTGAGGTTAAGaatacaGATCCAGTGCATGACATGCTCTTGGATGTTATCACCTGGGTTGGGATCCTTCTATCGCTGGTCTGCCTGTTGATTTGCATCTTTACTTTCTGCTTCTTTCGGGGTCTTCAAAGTGACCGCAACACAATCCACAAAAACCTTTGCATCAGCCTTTTCGTTGCTGAGTTACTCTTCCTCATCGGGATAAATCGTGCTGATCAGCCGATTGCCTGTGCTGTCTTCGCGGCACTGCTGCACTTCTTCTTCCTGGCGGCCTTCACATGGATGTTCCTGGAGGGGGTGCAGCTCTACATCATGTTGGTAGAGGTGTTTGAGAGCGAGCACTCCCGCAGGAAGTACTTTTACCTGGTGGGATATGGTGTCCCGGCGCTGATCGTGGCGGTGTCCGCCGCGGTGGACTACAGGAGCTACGGGACTGACAGAGTGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017768 True 999 mRNA 0.52 5 22615922 22640911

Neighbor

gene id symbol gene type direction distance location
AMCG00017769 NA coding upstream 19585 22596047 ~ 22596337 (+)
AMCG00017764 NA coding upstream 21942 22590793 ~ 22593980 (+)
AMCG00017767 NA coding upstream 52961 22562011 ~ 22562961 (+)
AMCG00017762 NA coding upstream 342566 22269271 ~ 22273356 (+)
AMCG00017760 NA coding upstream 352404 22257375 ~ 22263518 (+)
AMCG00017765 adgrl3 coding downstream 20155 22661066 ~ 22668453 (+)
AMCG00017766 NA coding downstream 45647 22686558 ~ 22687322 (+)
AMCG00017772 NA coding downstream 366112 23007023 ~ 23020463 (+)
AMCG00017774 NA coding downstream 461051 23101962 ~ 23129457 (+)
AMCG00017773 LOC106577627,LOC106944166,LOC103146371 coding downstream 502561 23143472 ~ 23152780 (+)
G92956 NA non-coding upstream 384030 22231457 ~ 22231892 (+)
G92954 LOC101154678 non-coding upstream 395143 22220524 ~ 22220779 (+)
G92952 NA non-coding upstream 463342 22152321 ~ 22152580 (+)
G92878 NA non-coding upstream 1486942 21128700 ~ 21128980 (+)
G92849 NA non-coding upstream 1730654 20883937 ~ 20885268 (+)
G93027 NA non-coding downstream 136817 22777728 ~ 22778103 (+)
G93039 NA non-coding downstream 237167 22878078 ~ 22878468 (+)
G93100 cj011,LOC106577738 non-coding downstream 679540 23320451 ~ 23321055 (+)
G93101 NA non-coding downstream 689579 23330490 ~ 23330720 (+)
G93102 NA non-coding downstream 689823 23330734 ~ 23330972 (+)
AMCG00017745 NA other upstream 1765305 20848356 ~ 20850617 (+)
AMCG00017747 NA other upstream 1793874 20799595 ~ 20822048 (+)
AMCG00017730 ppp3ca,LOC107084148,LOC106922390,LOC106958666,LOC102788851 other upstream 2612793 19993085 ~ 20003129 (+)
AMCG00017712 NA other upstream 3087629 19444172 ~ 19528293 (+)
AMCG00017710 nans,LOC108241509,LOC103384124,LOC107390934,LOC107390917 other upstream 3182819 19396028 ~ 19433103 (+)
AMCG00017783 NA other downstream 660704 23301615 ~ 23329569 (+)
AMCG00017817 phox2b,LOC101065912,LOC106604546 other downstream 1467649 24108560 ~ 24112110 (+)
AMCG00017829 smim14,LOC107700293,LOC107757606 other downstream 2064359 24705270 ~ 24715730 (+)
AMCG00017843 NA other downstream 2409398 25050309 ~ 25052374 (+)
AMCG00017886 NA other downstream 4351980 26992891 ~ 26997452 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location