AMCG00017772


Basic Information

Item Value
gene id AMCG00017772
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 23007023 ~ 23020463 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017772
CTTCATACAGTATATTGGGAACATCCTTCCTATGTTCCTGGTGCTGGCCTTTGTGTTCTCCACCTGCATGATTATTAAGGGACTTGTACAAGAGAAAGAGCTCCGTCACAAGGAGGTGTTGAGGATGGTGGGGGTGAAGAACAGCGTCTTGTGGTTTGCATGGTTCATGGACAACTTCCTCGTCCTCTTAGTGCCATCGGCACTGATATGTCTGATGGTAAAGTCTACTCAACCCCATCCAATCCCCGTGGAGCTCAGGTTCCAGGCTGGCCAGCTAGTGGAACAGTCTGGGTTTGAGCTGGCAACGTTTCTCCGCTCACTCTCGCGGTCACTGCCTCTCTTTATGACTCTGGCATGGATTTTCTCAGTGGCTATGATCGTGAAGGGCATTGTGCAAGAAAAGGAGGCCCGTCTGAAGGAGATGGTGAGGTTGATGGGTCTGAAACACGGCACCTACTGGCTAAGCTGGTTCATCAGCAGTGCTGTGCCACTGTGCCTTAGTGCCCTTCTTCTGACCCTCATCCTCAAGTTTGGCAAAGTCTTGAGGTACAGCGACCCTTcggttctgtttgttttcctggtggtgttttgtatttctacCATCATGGAGTGTTTCTTCATCAGCGTGTTCTTCTCCAAAGCCAACCTTGCCGCTGCATGTGGgggaatcatttattttgttctctacCTTCCTCATGTTCTGTGCTTTTCCTGGCAAGACATCCTAACATTCAACATAAAGATAATTGTGAGCCTCCTGTCATGTGTAGCCTTTGGTTTTGGCTGCGAAAACTTCTCCCGTTATGAAGAGCAGGGCATTGGCATTCAGTGGAGTAACATTGGAGTCAGTCCAGTTGATGGGGATCGCTACAGCCTTGTGGTCTCAATTTTCATGATGCTCATTGACTCTTTCATCTACTGGGTACTCACATGGTACATCGAGAATGTCTTCCCAGGTCAGTATGGAATACCAAGATCATGGTATTTTCCTTTTACTGCATCATATTGGTGTGGGATGTCAACAAACCCAGATGGTGACCCAGCTCTGTTAACTGCAACTGGAGCCAACAATGAGGCAGCATCACCTGATTTAAAACCCGGCGTCTCCATAAGGAACCTTGTGAAAGTGTACAATACTGGAAAGAAGCTGGCAGTGGATGGGCTGAGTGTTGATTTCTACCAAGACCAGATAACCTCTTTTCTTGGTCATAACGGAGCAGGAAAAACAACTACCATgTCAATTCTCACTGGATTATTTCCACCAACATCTGGAACAGCTTTCATTTATGGCAAAGATATTCGAACTGAGATGGATGCCATCAGAAATCATATGGGAATGATGACAGTGGaagagcacatttatttttatgcacgGTTGAAGGGAAGAAGCTCAAATGAAGTAAAAAGTGAAATGGACCAGATGATAAAAGATGTTGGGCTGCCACATAAAAGGAAAGAGTTGGTCAAAAACCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017772 True 1474 mRNA 0.46 9 23007023 23020463

Neighbor

gene id symbol gene type direction distance location
AMCG00017766 NA coding upstream 319701 22686558 ~ 22687322 (+)
AMCG00017765 adgrl3 coding upstream 338570 22661066 ~ 22668453 (+)
AMCG00017768 NA coding upstream 366112 22615922 ~ 22640911 (+)
AMCG00017769 NA coding upstream 410686 22596047 ~ 22596337 (+)
AMCG00017764 NA coding upstream 413043 22590793 ~ 22593980 (+)
AMCG00017774 NA coding downstream 81499 23101962 ~ 23129457 (+)
AMCG00017773 LOC106577627,LOC106944166,LOC103146371 coding downstream 123009 23143472 ~ 23152780 (+)
AMCG00017779 NA coding downstream 145884 23166347 ~ 23168345 (+)
AMCG00017778 LOC103387471 coding downstream 192948 23213411 ~ 23215360 (+)
AMCG00017775 rbpms,LOC107377421,LOC106526281,LOC107086924 coding downstream 207394 23227857 ~ 23249847 (+)
G93039 NA non-coding upstream 128555 22878078 ~ 22878468 (+)
G93027 NA non-coding upstream 228920 22777728 ~ 22778103 (+)
G92956 NA non-coding upstream 775131 22231457 ~ 22231892 (+)
G92954 LOC101154678 non-coding upstream 786244 22220524 ~ 22220779 (+)
G92952 NA non-coding upstream 854443 22152321 ~ 22152580 (+)
G93100 cj011,LOC106577738 non-coding downstream 299988 23320451 ~ 23321055 (+)
G93101 NA non-coding downstream 310027 23330490 ~ 23330720 (+)
G93102 NA non-coding downstream 310271 23330734 ~ 23330972 (+)
G93125 NA non-coding downstream 407269 23427732 ~ 23429155 (+)
G93131 NA non-coding downstream 420946 23441409 ~ 23441770 (+)
AMCG00017745 NA other upstream 2156406 20848356 ~ 20850617 (+)
AMCG00017747 NA other upstream 2184975 20799595 ~ 20822048 (+)
AMCG00017730 ppp3ca,LOC107084148,LOC106922390,LOC106958666,LOC102788851 other upstream 3003894 19993085 ~ 20003129 (+)
AMCG00017712 NA other upstream 3478730 19444172 ~ 19528293 (+)
AMCG00017710 nans,LOC108241509,LOC103384124,LOC107390934,LOC107390917 other upstream 3573920 19396028 ~ 19433103 (+)
AMCG00017783 NA other downstream 281152 23301615 ~ 23329569 (+)
AMCG00017817 phox2b,LOC101065912,LOC106604546 other downstream 1088097 24108560 ~ 24112110 (+)
AMCG00017829 smim14,LOC107700293,LOC107757606 other downstream 1684807 24705270 ~ 24715730 (+)
AMCG00017843 NA other downstream 2029846 25050309 ~ 25052374 (+)
AMCG00017886 NA other downstream 3972428 26992891 ~ 26997452 (+)

Expression


Co-expression Network