AMCG00017774


Basic Information

Item Value
gene id AMCG00017774
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 23101962 ~ 23129457 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017774
ATGAATGAGACTGAGATTGCAGCTCTTCTCGGGGAGTTGAAAAACATCTTCAATTCTTCTGAGggaAACCTAACTGATCAGATGCTGGGGAATGCAGAAATGTTCATGAAAGAACTTGGAACAAAGGATAATGTTAAGGTCTGGTTTTACAATGTGGGGTGGCATGCTATGGTTTCATTTCTAAACGTGGCCAACAATGCCATTCTGCGGGGGAATTTACGCACAGGCCAAGATCCCAGAGATTTTGGCATCACGACATACAATCACCCACTCAACCTGACAAAGGAGCAGCTGTCTGACATGGCTCTGGCCACCACCTCCACAGATGTCGTGGTGTCAATTTGTGTGATATTTGCAATGTCGTTCATACCAGCCAGCTTTGTGCTTTTCCTGATCCAGGAGAGAGTCACCAAGGCCAAGCACCTGCAGTTCGTCAGCGGTGTGAACCCTGGTGTTTACTGGATAGCTAACTTTGCCTGGGATATGTGTAATTACATCATCCCATGTTTGATAGTGATTATCATCTTCCTGTGCTTCCAACAAAAAGCATACGTCTCTAGTGATAACTTGCCAGCATTGATCCTTCTTTTAATTCTTTATGGGTGGTCTATCACCCCCCTTATGTATCCAGCATCATTCCTGTTCAGTATCCCCAGCACGGCCTATGTTGTACTTACATGTGTAAACCTTTTCATTGGAATTAATGGGAGTGTGGCTACGTTTAGCGTTACCcagattaataatattgtgaagCAGGTGTTGTtaatttttccacatttctgtCTGGGAAGAGGGCTTATTGACATGGCCAAGAACCAGGCGACTGCTACCATATTTGCAAGATTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017774 True 846 mRNA 0.44 7 23101962 23129457

Neighbor

gene id symbol gene type direction distance location
AMCG00017772 NA coding upstream 81499 23007023 ~ 23020463 (+)
AMCG00017766 NA coding upstream 414640 22686558 ~ 22687322 (+)
AMCG00017765 adgrl3 coding upstream 433509 22661066 ~ 22668453 (+)
AMCG00017768 NA coding upstream 461051 22615922 ~ 22640911 (+)
AMCG00017769 NA coding upstream 505625 22596047 ~ 22596337 (+)
AMCG00017773 LOC106577627,LOC106944166,LOC103146371 coding downstream 14015 23143472 ~ 23152780 (+)
AMCG00017779 NA coding downstream 36890 23166347 ~ 23168345 (+)
AMCG00017778 LOC103387471 coding downstream 83954 23213411 ~ 23215360 (+)
AMCG00017775 rbpms,LOC107377421,LOC106526281,LOC107086924 coding downstream 98400 23227857 ~ 23249847 (+)
AMCG00017770 NA coding downstream 142142 23271599 ~ 23276170 (+)
G93039 NA non-coding upstream 223494 22878078 ~ 22878468 (+)
G93027 NA non-coding upstream 323859 22777728 ~ 22778103 (+)
G92956 NA non-coding upstream 870070 22231457 ~ 22231892 (+)
G92954 LOC101154678 non-coding upstream 881183 22220524 ~ 22220779 (+)
G92952 NA non-coding upstream 949382 22152321 ~ 22152580 (+)
G93100 cj011,LOC106577738 non-coding downstream 190994 23320451 ~ 23321055 (+)
G93101 NA non-coding downstream 201033 23330490 ~ 23330720 (+)
G93102 NA non-coding downstream 201277 23330734 ~ 23330972 (+)
G93125 NA non-coding downstream 298275 23427732 ~ 23429155 (+)
G93131 NA non-coding downstream 311952 23441409 ~ 23441770 (+)
AMCG00017745 NA other upstream 2251345 20848356 ~ 20850617 (+)
AMCG00017747 NA other upstream 2279914 20799595 ~ 20822048 (+)
AMCG00017730 ppp3ca,LOC107084148,LOC106922390,LOC106958666,LOC102788851 other upstream 3098833 19993085 ~ 20003129 (+)
AMCG00017712 NA other upstream 3573669 19444172 ~ 19528293 (+)
AMCG00017710 nans,LOC108241509,LOC103384124,LOC107390934,LOC107390917 other upstream 3668859 19396028 ~ 19433103 (+)
AMCG00017783 NA other downstream 172158 23301615 ~ 23329569 (+)
AMCG00017817 phox2b,LOC101065912,LOC106604546 other downstream 979103 24108560 ~ 24112110 (+)
AMCG00017829 smim14,LOC107700293,LOC107757606 other downstream 1575813 24705270 ~ 24715730 (+)
AMCG00017843 NA other downstream 1920852 25050309 ~ 25052374 (+)
AMCG00017886 NA other downstream 3863434 26992891 ~ 26997452 (+)

Expression


Co-expression Network