AMCG00017779


Basic Information

Item Value
gene id AMCG00017779
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 23166347 ~ 23168345 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017779
ATGGAACAGCTTAGGTTTGGTGATGGCTACACTGTGATTGTGAGAGTTGGTGGGTCTCCTCCTGTGCTCAAGCCAGTAGAGGACTTTGTGCAAGACGTTTTCCCCGGTAGTATACTGAAAGAAAAGCATCACAACACGCTGCAGTACCAGCTGCCCTGCGGTGAGAGTGCTCTCTGCAGGATCTTCAGTGAATTCAGCAGCCGCAAGGAGAGGCTCTGCATTGAGGACTACTCTGTGTCTCAGACCACCCTTGATCAGGTGTTTGTCAATTTTGCTAAACAGCAGGATGAGGAGGAAGATCCTCAAGTACATGTCAACCCTGTTGATGTGACATCAGATGAGGTGCCCATGAAACTGCTAATGACCGGCCCTCCTGCcgaaaatgtttga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017779 True 390 mRNA 0.50 3 23166347 23168345

Neighbor

gene id symbol gene type direction distance location
AMCG00017773 LOC106577627,LOC106944166,LOC103146371 coding upstream 13567 23143472 ~ 23152780 (+)
AMCG00017774 NA coding upstream 36890 23101962 ~ 23129457 (+)
AMCG00017772 NA coding upstream 145884 23007023 ~ 23020463 (+)
AMCG00017766 NA coding upstream 479025 22686558 ~ 22687322 (+)
AMCG00017765 adgrl3 coding upstream 497894 22661066 ~ 22668453 (+)
AMCG00017778 LOC103387471 coding downstream 45066 23213411 ~ 23215360 (+)
AMCG00017775 rbpms,LOC107377421,LOC106526281,LOC107086924 coding downstream 59512 23227857 ~ 23249847 (+)
AMCG00017770 NA coding downstream 103254 23271599 ~ 23276170 (+)
AMCG00017771 NA coding downstream 111404 23279749 ~ 23289355 (+)
AMCG00017786 NA coding downstream 127148 23295493 ~ 23296647 (+)
G93039 NA non-coding upstream 287879 22878078 ~ 22878468 (+)
G93027 NA non-coding upstream 388244 22777728 ~ 22778103 (+)
G92956 NA non-coding upstream 934455 22231457 ~ 22231892 (+)
G92954 LOC101154678 non-coding upstream 945568 22220524 ~ 22220779 (+)
G92952 NA non-coding upstream 1013767 22152321 ~ 22152580 (+)
G93100 cj011,LOC106577738 non-coding downstream 152106 23320451 ~ 23321055 (+)
G93101 NA non-coding downstream 162145 23330490 ~ 23330720 (+)
G93102 NA non-coding downstream 162389 23330734 ~ 23330972 (+)
G93125 NA non-coding downstream 259387 23427732 ~ 23429155 (+)
G93131 NA non-coding downstream 273064 23441409 ~ 23441770 (+)
AMCG00017745 NA other upstream 2315730 20848356 ~ 20850617 (+)
AMCG00017747 NA other upstream 2344299 20799595 ~ 20822048 (+)
AMCG00017730 ppp3ca,LOC107084148,LOC106922390,LOC106958666,LOC102788851 other upstream 3163218 19993085 ~ 20003129 (+)
AMCG00017712 NA other upstream 3638054 19444172 ~ 19528293 (+)
AMCG00017710 nans,LOC108241509,LOC103384124,LOC107390934,LOC107390917 other upstream 3733244 19396028 ~ 19433103 (+)
AMCG00017783 NA other downstream 133270 23301615 ~ 23329569 (+)
AMCG00017817 phox2b,LOC101065912,LOC106604546 other downstream 940215 24108560 ~ 24112110 (+)
AMCG00017829 smim14,LOC107700293,LOC107757606 other downstream 1536925 24705270 ~ 24715730 (+)
AMCG00017843 NA other downstream 1881964 25050309 ~ 25052374 (+)
AMCG00017886 NA other downstream 3824546 26992891 ~ 26997452 (+)

Expression


Co-expression Network