AMCG00017791


Basic Information

Item Value
gene id AMCG00017791
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 23458927 ~ 23464763 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017791
ATGTCCTCCTTAAAGTTGCTGAGAGAACTTCGAGTCACACTGGTGGACGAGCTTGAAGCCTGTGTCAACTACCTAATGGAGCAGATGGTTCTCAGAGAAGTGTTGACCAGAGATGACCGGGAAGAGATATTAATTAATCCTGGGCCTCGAAAGAGAGTCAGGAAATTGCTTGACATCATTGACTGCAAGGGAGAAGAGGTTGCCAGCACATTCCTGTCCATATACAGCAAGCTGAATGAGGTCAAGGCAAAGGTAGTCCCTGAACCATCAGAGCAAGCACTGTCAGATGACTACAGCAACCTGATTCACAAACATAAACGAGTACTTAAGCTAAGGAATGCAAGTATGTTGTATTACAACACACGACATGGCGAGAAAATCTCCTTCTGTGAACACTTTGTAAATCTCTTGCTTGTCAAAGGACACTCCAGCATCGAAAACAAAAAGCACGAACTTCTGGCTTTCGGACAGCAAAGGATTCACTTACAACACCGATCGAAGGAGCAAACCATGATTAAACCGGCACAACTGTTTTCAGACACAAAGGCAGCAAGATGCGCAAAGAAAATCCTGGTAACGGGGGTCGCAGGCATAGGAAAAACAGTGTTGGTCCAGAAGATATTGTGCGACTTTGGGAATAACCAAGGGTTTTCCATGTTTGACTTTGTGATTCATTTAACTTTCAGGGACCTTAATTTAATTAGCACACCAGTCAGCTTGAGGGACTTGGTTCTGCGCAAAAATGGACACTTAGCTAAAGCCCTGGATGACATATTTCTAAACGATGAAAAGCTGTTGATCATTCTTGATGGTTTTGATgagtttaaatattataaaggATGCGAGGTAGAGCAGTTTATTACTGACCATGACCAGCAGGGAGAAGTGGTGGAGATATTTGCTAGCATAATGCTTGGGGAACTTCTTCCAGAGGCATCAGTCTTGCTTACTAGCAGACCTACAGCCATCAGTTACATCCCCACCAACTGCATTGATAGCTTTGTAGTTGTCACTGGATTCTCCGTGAGTGAAATTAAGGATTTCTTCCTGAAGTATTTTCTGGATGAAGACCTGGCTGTGAAAATGTTTGATCTTGTCAAGGCAAACGACTTGATGTTAACACTGTGCTACATACCGGCATTCTGCTATATTGTGtgcagcattttaaaagaaagcaaaggGCCTATGACAGAAAGCCCTAAAACAATGACTGACATTTATGTGCACTACCTAGTAGCACTGATGAAATCTCACACTCACAGCAGGACTGGTTATGCCTGCAACAGCAGCTCAGAAAATATGAAGCAACTGACAGAGACTGTGGTTAACCTAGGACACCTGGCCTATATCAAATTCCTGCAGCATGAGACTCTCTTTTATGGAGACACTGCTGAAGTGCAGCAAGTGGCCAGCAGTGATCTTGTGAGTACTTTTCTAGACAAAACATCAGTTCAGGAGCCATACGGTTCAGTGGATGTCTATTCATTCACTCACTTTACTGTCCAAGAATTCTTTGCAGCCCTGTACTACGTGCTGGCCAAAAAGCCACATCCAGATGTCTGTGATTCCAAAGTCCATTGTAAACAAGAGATGAGTGCTGGATACCAGGACCTATTCAATAGATTTCTATCTGGACTTCTTTCAGAAAGGAACCAAAATCTGCTCTCCAAACACATACAGTTGAGAGCAAATGATAAGTCTGAATGGTATGTCCCTTGGCTGCTTGGGGAAATCCAAAGGCTCTGTGAGAGTGGAGCTCATATTCTAAGCCACCTACATTGTTTTTTTGAGCAGCAGAACATTTCATTGGCAGAAAAGATTCAGCCTGAGCTGCTACGTGTAAACGTAAGTGACGACCCTCTTTCGCCAATGGACTTTAGCACGATGAAGTATTTCTTAACCCTTATAATGAATATAACCCTGCAGATGCCTTGTATCATGTACAGTGCCCTGTGGAATGATGTGAGTGAACCAGAAGCAGAGAAACTGAAGGGGAACTCTGCTGAAGAATTATTGGTTGTCACCTTTACAGATGATAAAATTTGGCAAGAGTGGGGTGAATGGGTTCTACATAGGTGTGAAGTAAGCAGTGACGAGAAACTTGTGAATGTTCTCTTTAAAGTCTGTAATGCTTTCATTTGTAGTTTGGAAATACACTGGGTACAGGAATGGTACACAAAACTAAGACACCTGATAAGAACCAGAATTAATCAATGCAGTGAAGATGAAATGCAAAGGAAACTGGAAAagtttgaaacaatgttaaacTTTTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017791 True 2274 mRNA 0.42 3 23458927 23464763

Neighbor

gene id symbol gene type direction distance location
AMCG00017790 NA coding downstream 1911 23445924 ~ 23457016 (-)
AMCG00017788 NA coding downstream 28714 23423691 ~ 23430213 (-)
AMCG00017789 NA coding downstream 36801 23411661 ~ 23422126 (-)
AMCG00017787 NA coding downstream 70432 23355606 ~ 23388495 (-)
AMCG00017781 acer2,LOC107691831,LOC107675399,LOC107601172,LOC107559953 coding downstream 113010 23330944 ~ 23345917 (-)
AMCG00017792 NA coding upstream 4076 23468839 ~ 23519026 (-)
AMCG00017795 dnaja1,LOC106591825,LOC108431796 coding upstream 152917 23617680 ~ 23627418 (-)
AMCG00017796 LOC105419749 coding upstream 168692 23633455 ~ 23646547 (-)
AMCG00017807 NA coding upstream 206881 23671644 ~ 23690436 (-)
AMCG00017805 NA coding upstream 285608 23750371 ~ 23760237 (-)
G93165 NA non-coding downstream 129183 23326525 ~ 23329744 (-)
G93159 NA non-coding downstream 162681 23295800 ~ 23296246 (-)
G93092 NA non-coding downstream 163558 23294819 ~ 23295369 (-)
G93090 NA non-coding downstream 168246 23290332 ~ 23290681 (-)
G93038 NA non-coding downstream 619493 22839151 ~ 22839434 (-)
G93324 NA non-coding upstream 442812 23907575 ~ 23910679 (-)
G93350 NA non-coding upstream 569933 24034696 ~ 24037610 (-)
G93355 NA non-coding upstream 579431 24044194 ~ 24046369 (-)
G93399 NA non-coding upstream 836657 24301420 ~ 24301980 (-)
G93434 NA non-coding upstream 1040619 24505382 ~ 24505610 (-)
AMCG00017780 LOC101079287,LOC106577738,LOC100690429,LOC105925506,LOC108244244 other downstream 136973 23318093 ~ 23321954 (-)
AMCG00017725 NA other downstream 3100302 20302000 ~ 20358625 (-)
G92591 nansa,LOC108416893,LOC108416857,LOC107723182 other downstream 4039571 19412987 ~ 19419356 (-)
G92436 NA other downstream 4995751 18462784 ~ 18463176 (-)
AMCG00017675 NA other downstream 5669178 17781648 ~ 17789749 (-)
AMCG00017819 NA other upstream 799916 24264679 ~ 24270595 (-)
AMCG00017839 NA other upstream 1481332 24946095 ~ 24949136 (-)
AMCG00017844 frmpd1b,frmpd1,LOC107750435,LOC107570223,LOC107655878 other upstream 1532781 24997544 ~ 25018212 (-)
AMCG00017861 LOC103354863 other upstream 2480378 25945141 ~ 25957648 (-)
AMCG00017866 smim19,LOC107754471,LOC106604684,LOC106611785 other upstream 2547725 26012488 ~ 26015942 (-)

Expression


Co-expression Network