AMCG00017800


Basic Information

Item Value
gene id AMCG00017800
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 23767371 ~ 23770666 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017800
ATGGAAGAGACATCCACTTCAACAAGTGTTCAGAGTTGCAGTATGGAGCGCACAATGAGTGCCACGACCCGCACAGTATATAAAGAGCTGTGGCTGAAGGGGCAGCTGTCTGATGTGGTAATAATGGTGGAGGGCACTGCATTCAATGCCCACAAGATCATCTTGTGTGGCAGCAGCAGCTATTTTCGGCCCCCCGAGAcctcagctggaatgaaaaccagataCAAAGGGAGATTAAAGAGGAGCAGCCTTGAGTCGGCGGCCCACCGTTACATCCTGCGCCACTTTGAGGACTTGGTCGAGGCTTCCAACGACTTCCTGGAGCTCTCCCTGGACCAGCTGCTCAACATCATTGAGAAGGATGACCTCAACATCAAGCAGGAGGACGTGGTCTTTGAGGCCATCCTGCGCTGGATCAACCACGCGCCCAGTGAGCGGCGCGGCCACATCTCCGTCCTGCTGCCCAAGGTGCGGATGGCACTCATGGAGTTACAGCATATCATTACCAAAGTCAGGGACAACGAGCTGGTGAAGCAGACCAAAGAGTGCAAGGCCACAGTCATCAATGCGCTCAAGGCCAGCCACTACCGCACCATAAATGGCCCCTCCGACTTGGACTTCCGCAAACTCATGACCAGGCCGCGGCAACCCTGTGACATCATGTTGTCAATCGGGGGCTGGAGTGTAGGCAACCCCACCAATGCCATGGAGGCATATGACGCAAGGGGTAAACGCTGGTTGAATGTCACCATCCCGGAGGAGAGCCCACGGGCCTACCACGGGGCCGCCTACCTCAAGGGCTGGGTGTACTGCGTGGGCGGCTTTGACGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017800 True 831 mRNA 0.56 4 23767371 23770666

Neighbor

gene id symbol gene type direction distance location
AMCG00017803 abca1b coding upstream 19115 23713943 ~ 23748256 (+)
AMCG00017798 NA coding upstream 95704 23648208 ~ 23671667 (+)
AMCG00017793 NA coding upstream 134703 23627901 ~ 23632668 (+)
AMCG00017794 LOC103353869,LOC108275199,LOC100699015,LOC101470794 coding upstream 151408 23610238 ~ 23615963 (+)
AMCG00017784 NA coding upstream 323454 23439746 ~ 23443917 (+)
AMCG00017801 NA coding downstream 11202 23781868 ~ 23793676 (+)
AMCG00017802 NA coding downstream 25133 23795799 ~ 23799246 (+)
AMCG00017797 NA coding downstream 74256 23844922 ~ 23857827 (+)
AMCG00017799 polr2b,LOC102791558,LOC107750329 coding downstream 93216 23863882 ~ 23875075 (+)
AMCG00017810 NA coding downstream 123738 23894404 ~ 23909195 (+)
G93231 NA non-coding upstream 1889 23759740 ~ 23765482 (+)
G93208 NA non-coding upstream 90279 23676800 ~ 23677092 (+)
G93207 LOC107571907,LOC107703852,LOC108427439 non-coding upstream 91820 23675250 ~ 23675551 (+)
G93131 NA non-coding upstream 325601 23441409 ~ 23441770 (+)
G93125 NA non-coding upstream 338216 23427732 ~ 23429155 (+)
G93236 NA non-coding downstream 38641 23809307 ~ 23809908 (+)
G93237 NA non-coding downstream 39359 23810025 ~ 23812448 (+)
G93238 NA non-coding downstream 43180 23813846 ~ 23814421 (+)
G93241 NA non-coding downstream 47665 23818331 ~ 23820523 (+)
G93354 NA non-coding downstream 273512 24044178 ~ 24047768 (+)
AMCG00017783 NA other upstream 437802 23301615 ~ 23329569 (+)
AMCG00017745 NA other upstream 2916754 20848356 ~ 20850617 (+)
AMCG00017747 NA other upstream 2945323 20799595 ~ 20822048 (+)
AMCG00017730 ppp3ca,LOC107084148,LOC106922390,LOC106958666,LOC102788851 other upstream 3764242 19993085 ~ 20003129 (+)
AMCG00017712 NA other upstream 4239078 19444172 ~ 19528293 (+)
AMCG00017817 phox2b,LOC101065912,LOC106604546 other downstream 337894 24108560 ~ 24112110 (+)
AMCG00017829 smim14,LOC107700293,LOC107757606 other downstream 934604 24705270 ~ 24715730 (+)
AMCG00017843 NA other downstream 1279643 25050309 ~ 25052374 (+)
AMCG00017886 NA other downstream 3222225 26992891 ~ 26997452 (+)
AMCG00017898 kcnip4,LOC103360335,LOC100711851,LOC102780455 other downstream 3702215 27472881 ~ 27697379 (+)

Expression


Co-expression Network