AMCG00017804


Basic Information

Item Value
gene id AMCG00017804
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 23857838 ~ 23863656 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017804
GCTGATTGAAAAAAAAGATGGACGACTCCTAGCAGTTCCacatgttgtttattattattatttttattgaaggtTAAATAACCAACAACACCGTTCAACGGATATCACAAATACTTCGTATAAGGGGAAAAATGCAACGATTATTCCAGCTCACTCTAAAGcaatattgtaaatgttattgCTCTCGAAACCTGACCTGCTTGCAAGTGCAAAGGTTTGGGAATGACATTCATAGACTACGATCGACAGGTATCCCACGTGTTCCTGGTCTAATTACAACGGGGCAAAGTTTCAAAAGTAAATCTCCAACGTGCATTTCAGACCACGCATTGGTCAGATGCTACAGTGGCGGAGGAGGATCAGAAAGAACCATTCGCGAAAGGGCAAAGGCTTCATACAGATACACGTCTGTTGACccagaaagagaagaagaatTCGTTTTTGTGGACTACACATCAACCCCAGAGGAAACGAGTGACGATCATTTTGAAATCCCGGCCCTTGGAGCATGTCCGCAGAGCACAGAGAAGAAAGCTAAGCATGGGTCGGGTACAGAGGTGTATCACAGAGCCATCGAATTGCAACGACAATATTTGGAAACTGTCATGAACCCAGAATCAGAAATAGAGTTTCACGATGCCGGATACCCCCCTCATAACGTGAACtctaaaaagaagaaaaaacataagaTTTACGGCACGCCTGATAAGGGGGTCCCCCTGAGTGACACCCACTGTTCAGGCTGTGGGGCTTTGATGCATTGCACGGAACCCCTTTTGCCTGGGTATGTACCTAGTGAGAAATACAAACGACTAGTCGAAGAAAAGAAGCTCGACACATCGGTTTGCCAGCGGTGCTATTTGATCGTCCATCACCAGAAGGCATTGCATGTTCAGGTTTCCAAAGAGGAATATCGCGGTATCGTAAGTCGTATCCGACAAGAGAAAGCATTGGTTTTGCTGATCGTGGACGTGTTGGATCTGCCCGATTCTATAATCCTAGATCTATTGGAGCTGgtaggggaaaataaaaacatagtgGTGTTGGGAAATAAGATCGACCTGCTTCCCGCAGACTCTAGCAATTATCTAAAACGTGTCAAGCGACAGCTGCTGGCTTACTGCGTTGAAGCGGGCATCTCATCTGATAGAAACATCACCGACGTCCACCTGATCAGTGCCAAGACCGGGTATGGCATAGAAAACTTGATCTCTAGCCTCCAGAGCTCATGGAAATATAAAGGAGATGTGTATTTGGTGGGGACCACAAACGTGGGAAAATCGACACTCTTTAACACTTTGCTCGAGTCAGACTACTGTAAATCTAAAGCACCAGAAGTCATTCAGAAAGCAACAATCTCTCGATGGCCAGGAACCACACTCAATCTCCTGAAGTTCCCCATCATCAATCCCACTCCCTATCGCATGTTCAGGAGGTCTGAGAGACTGAAGGGTGATGCTTCTCAGTCTGACAAGGACCTGAGCCCCCAGGAGCTGAAGAGATTGCAGCAGCTCCGCAGACAGGGTTATTTAGTTGggcGAGTTGGAAGAACGTTTCGCTCAGCTGGGCAGAGTTACAGAGATGCTGATGTTGTAGAGTTTGATTACGAAGACCTCAGTTTggctggggaggaggaggaaggatcAGGCAGCGTCTTGAAGCCCACCAAACCAGTGGAGTTCACTCACAATGAGCTCAAAGATGCCCACTGGTTGTATGACACCCCAGGCATTGTGAAAGaacagtgtGTTCTTAGTTTGCTGACAGATCAGGAGCTAAAGATGGTGGTGCCCACTCATGCCATCACACCCAGGACCTTTGTACTGAAGCCAGGAATGGTGCTGTTTCTGGGTGCTTTGGGACGCATCGATTTTCTTAAGGGTGAGAAATCGTGTTGGCTCTCAGTTATTTCCTCTAATCTGCTGCCAGTTCACATCACCAGTCTGGAGAGAGCAGATGAAATTTACCAGAAGCATGCTGGGAAAGCACTTCTTGGGGTTCCTATCGGTGATGATGAGCGCATGAAACAGTTCCCACCTCTTGTTCCGCAAGACGTTGAGTTGAGGGGAGTGGGGCCTGAACTGGCAGTGGCTGACATCAAGTTTTCATCTGCAGgctggGTGGCGGTGACGGCTCAGGCCGAGGACCAGCTGCTGCTCCGGGTGCACGTGCCTGCGGGGGCCGGGCTGGGCCTGCGCACACCGCCGCTGCTGCCCCACGTCGTCCTGCTGAAGGGGGAGAGGATCAGGAAATCTCCTGCCTACAAAACCAAAAAGCCCACGGCCATGCTGGACAACAGCCGGTCTACTGCTGGAGCAGGGAGGTTACAGTTCAAGAAGatcaaaaaataatttccctccaTGCTATAAAGTCTGTTTCTGGATTGATTTTTAGACTGGGATCATCAGCCACTAAGGCATGCTCTTGCTGAGGATCTGTTGCTAATCACAAATACAGCTGACATGTTAATTATCTGTTTACTTAGAAaccagcttttatttatttatagagagCTGAGGCCACCAGTAGAGTACGTTTAAGGATCTAAATGAGGCCATCAAGAGATTGGAATTATTTTTACAGATGTGGTCAGTAACATCCTTAAATATGCTACCTAATAAAggtaatttcaaaatgttaacaaGAAAGCATAATTGTTCTATAATTTTACATACTATTTATTCTTGACTTTGTATAATAAACTAAACATTCTtgacattttatgtaatttgtatatgAATCCATGTTAACAGTAGTGTCACATTATTGGTCATCCGAGACCAAGTTTAGGACTAGATGGCAGCACTGGACATTTCTTTATGGAGAATAATCCAGTTCAGTGAAGCAATATGttgaataatacataaataaataaaaaacacggGTGTAATTTACCCTGGCttacattacatattatttggcacacagaaaatgtgtctATGAGGTAACACTGTGTCAAGAGTATAGGCAGTTGTCTACCCAACATCAGATACTGTGTGCAGGTCcatctaaatgtattttgcatttgtgcttattttgtgggtgtaattttatatatagattatacAGCCTTGCTTATGTGACATGGATTGAGAATTTGTGTACATAATCCTGACACCTAGCACAGAGGCTGTGTTTACTTTTGGTCCATAAACAAGGCCTTTGTCATTTTCTCTATTGTTCTAAGAATGGTTTCCCACACGTCTTTGTGTTCCACTTAAATCCACGGAGACTTGAGAAATGTCCACAAATAACCCTGTGACAACTAGAGCAGCTTTAACTTTTATTGAAAAATTCTACAGTGTTTATCTACAGCATGGCAGCAGTTCAAATACACTGGAAAAGTCAAATGCAGAAAAGCAAATGACTCCGTATCCCTTTCTTTCTTGAATTGCACACAGATTTTAAACCAAATcttcaatatgaaaaataatgcagATCAATTATACGGATATACTATACTCTGATtagaaacatttgcaaaatgGTGGATCATCTAGTCCTTCAGGACATTATCACTTACCATGGCTTTCCAAATTCAAACTCAGTCGTACAGTATGAATGATTACTGAAGTTCCTGAAACCAGCTGCATTACCAAAGCATGCAAgttcaatattaaaaagaatttgaaataaatgcaattgGCCATAGCAGAAGAAAATCTGTTGCAATTGCTGGATGggcaatacaaaacacattgtaGGTTatcatactgaaatgcatattttattttctgactttCAGTCCTGCCAATGGATTTGATAAAGCTCAGATTTCAACACAAGAAAAGTGGATACAGTTTCATTTAGAACAAAGAACAAATGGCAAATTACAGATATATACTTTTGATTACATTAATGATACATACATTGGAAAGAGTCACAGTGCTTTTCTTTCTAACTGCATAAAATGACCTACTCATtatgggaaaacaaatgtacacagaTAATCATTTCCAATGAGATAAAAACAGTAATATGTGGAGATATCTTAATACACAAATCTAAGAAAAGCTAACCACCCAAGATGAGTGCATTTTCATGTCAGATAGAGCACTTGAAATAAACACTACGTCCCCAGCACACACCAGTTTTA

Function

GO: NA

KEGG:

id description
K19832 NOA1; nitric oxide-associated protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017804 True 4096 mRNA 0.42 7 23857838 23863656

Neighbor

gene id symbol gene type direction distance location
AMCG00017806 LOC108277608 coding downstream 17675 23821734 ~ 23840163 (-)
AMCG00017808 NA coding downstream 45390 23795913 ~ 23812448 (-)
AMCG00017805 NA coding downstream 97601 23750371 ~ 23760237 (-)
AMCG00017807 NA coding downstream 167402 23671644 ~ 23690436 (-)
AMCG00017796 LOC105419749 coding downstream 211291 23633455 ~ 23646547 (-)
AMCG00017811 NA coding upstream 11467 23875123 ~ 23884454 (-)
AMCG00017812 NA coding upstream 21528 23885184 ~ 23893945 (-)
AMCG00017815 tmem33,LOC107741195 coding upstream 185166 24048822 ~ 24053932 (-)
AMCG00017818 limch1 coding upstream 255821 24119477 ~ 24253084 (-)
AMCG00017824 NA coding upstream 576880 24440536 ~ 24568029 (-)
G93173 NA non-coding downstream 317718 23444211 ~ 23540120 (-)
G93165 NA non-coding downstream 528094 23326525 ~ 23329744 (-)
G93159 NA non-coding downstream 561592 23295800 ~ 23296246 (-)
G93092 NA non-coding downstream 562469 23294819 ~ 23295369 (-)
G93090 NA non-coding downstream 567157 23290332 ~ 23290681 (-)
G93324 NA non-coding upstream 43919 23907575 ~ 23910679 (-)
G93350 NA non-coding upstream 171040 24034696 ~ 24037610 (-)
G93355 NA non-coding upstream 180538 24044194 ~ 24046369 (-)
G93399 NA non-coding upstream 437764 24301420 ~ 24301980 (-)
G93434 NA non-coding upstream 641726 24505382 ~ 24505610 (-)
AMCG00017780 LOC101079287,LOC106577738,LOC100690429,LOC105925506,LOC108244244 other downstream 535884 23318093 ~ 23321954 (-)
AMCG00017725 NA other downstream 3499213 20302000 ~ 20358625 (-)
G92591 nansa,LOC108416893,LOC108416857,LOC107723182 other downstream 4438482 19412987 ~ 19419356 (-)
G92436 NA other downstream 5394662 18462784 ~ 18463176 (-)
AMCG00017675 NA other downstream 6068089 17781648 ~ 17789749 (-)
AMCG00017819 NA other upstream 401023 24264679 ~ 24270595 (-)
AMCG00017839 NA other upstream 1082439 24946095 ~ 24949136 (-)
AMCG00017844 frmpd1b,frmpd1,LOC107750435,LOC107570223,LOC107655878 other upstream 1133888 24997544 ~ 25018212 (-)
AMCG00017861 LOC103354863 other upstream 2081485 25945141 ~ 25957648 (-)
AMCG00017866 smim19,LOC107754471,LOC106604684,LOC106611785 other upstream 2148832 26012488 ~ 26015942 (-)

Expression


Co-expression Network