AMCG00017808


Basic Information

Item Value
gene id AMCG00017808
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 23795913 ~ 23812448 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017808
GAGAAAAAACAAGTCAGCATTGACCCAGACGTGCTTGGGGAGAACCTTCAGAGAACATCTAAGCTGATTGCTTTTTCTTTGGAAAATAATGAGCTGTTGAAGGAGAAATGTCACCTTGAACAGTCTGTACAGAGACTCTCCGCACACTTGAAGATGACAGAGAGCAGCAAGGAGAAGCTGGAGTCCCAGGTTTCGAAGCTCCACTCAGAGCTCTTTCAAGCACGCTGCCAGGAACACAGACTGGAGAAGGTCAAACTCCAGACAGAGTCGGAGCTCACAGGCAGCAGACAAGTCAACGAAAACATGTTACATGAATTAACATTGGTGAGACACAAAATGACATTGTGTGAGGAGCAGGTGACACGCCTGGAGAGTGAGAGGAACATCTCCACAGTGAAGATCAAAGCCTTggaatcagagaggcaacagcTGATCAGCCAGAAAGAACTGCTTCTACAGATACTGAAGAAATCAAAATCTCCACAAGGAGTGATTGAGGTCTCCTGCTGTGGTTTGAAAAGGAGTGCTGTGGATGTGGAAGCGAAAGCATGTGTTGACTGTGAGAAGGTGGGGAGAGAGCTGAGAGATGTGAAAGTCCAATTAAGCCTTTTGCAGGAAGAGCGGCGGGCAGTGGGCCCTGCAGACACGGCAGCCACCCCCCCACTGCCACAGCCTGCTGAGTTGCAGCAGGAAGAGGTGGGAGATAAGACCAGGAAGCTTCTGGAAGTGTGTGAAGAGCAGAAGAAGAGTATAGAGGATTTGACGATTCTTAGGCAGAAACTTGAGCTGTCCCTGGAGAAGTTTAACAGGAGGATCATGGGAATCGCAGACTGGGAAGAAATGATAAGAATACTGAAAGTTCAGAAGGAGTTTCTTTCTCAGATGGTTGATGACCCTGAAATCCCAGAGGAGAAGCACAGTTGCAGCCCAGTGCAGGGATGTGAAAGGGAGACTGTTATTGGCCTGGATGACTGTTGTGATGATGAACAGGCCGACATCAACCAGAACTGCATTGATGCCATCCAGAGCAATGACACAAAGCTGGCCTCCTTGAGAGGAGAGAACAGGAGGATCCAGGAAGCTATCCTCGAAGAACAACTGGATGCGATGAGGGCGGAGGTCATGGCGCTTCAGGACGCCCTTCACTCAAAGAACAAGTCGATTAGTCTCCTTGTGGCGCAAAATGCCGCTTTTACAGACGAGGACTTCGTCTCCATTGCGCCGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017808 True 1227 mRNA 0.49 10 23795913 23812448

Neighbor

gene id symbol gene type direction distance location
AMCG00017805 NA coding downstream 35676 23750371 ~ 23760237 (-)
AMCG00017807 NA coding downstream 105477 23671644 ~ 23690436 (-)
AMCG00017796 LOC105419749 coding downstream 149366 23633455 ~ 23646547 (-)
AMCG00017795 dnaja1,LOC106591825,LOC108431796 coding downstream 168495 23617680 ~ 23627418 (-)
AMCG00017792 NA coding downstream 276887 23468839 ~ 23519026 (-)
AMCG00017806 LOC108277608 coding upstream 9286 23821734 ~ 23840163 (-)
AMCG00017804 NA coding upstream 45390 23857838 ~ 23863656 (-)
AMCG00017811 NA coding upstream 62675 23875123 ~ 23884454 (-)
AMCG00017812 NA coding upstream 72736 23885184 ~ 23893945 (-)
AMCG00017815 tmem33,LOC107741195 coding upstream 236374 24048822 ~ 24053932 (-)
G93173 NA non-coding downstream 255793 23444211 ~ 23540120 (-)
G93165 NA non-coding downstream 466169 23326525 ~ 23329744 (-)
G93159 NA non-coding downstream 499667 23295800 ~ 23296246 (-)
G93092 NA non-coding downstream 500544 23294819 ~ 23295369 (-)
G93090 NA non-coding downstream 505232 23290332 ~ 23290681 (-)
G93324 NA non-coding upstream 95127 23907575 ~ 23910679 (-)
G93350 NA non-coding upstream 222248 24034696 ~ 24037610 (-)
G93355 NA non-coding upstream 231746 24044194 ~ 24046369 (-)
G93399 NA non-coding upstream 488972 24301420 ~ 24301980 (-)
G93434 NA non-coding upstream 692934 24505382 ~ 24505610 (-)
AMCG00017780 LOC101079287,LOC106577738,LOC100690429,LOC105925506,LOC108244244 other downstream 473959 23318093 ~ 23321954 (-)
AMCG00017725 NA other downstream 3437288 20302000 ~ 20358625 (-)
G92591 nansa,LOC108416893,LOC108416857,LOC107723182 other downstream 4376557 19412987 ~ 19419356 (-)
G92436 NA other downstream 5332737 18462784 ~ 18463176 (-)
AMCG00017675 NA other downstream 6006164 17781648 ~ 17789749 (-)
AMCG00017819 NA other upstream 452231 24264679 ~ 24270595 (-)
AMCG00017839 NA other upstream 1133647 24946095 ~ 24949136 (-)
AMCG00017844 frmpd1b,frmpd1,LOC107750435,LOC107570223,LOC107655878 other upstream 1185096 24997544 ~ 25018212 (-)
AMCG00017861 LOC103354863 other upstream 2132693 25945141 ~ 25957648 (-)
AMCG00017866 smim19,LOC107754471,LOC106604684,LOC106611785 other upstream 2200040 26012488 ~ 26015942 (-)

Expression


Co-expression Network