AMCG00017811


Basic Information

Item Value
gene id AMCG00017811
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 23875123 ~ 23884454 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017811
GTTTCTGAATATATAATCATAGCTTCTATAgaataatgaaatatgtattcatgtagTTTAAAGCCCTACATAAAATGCTGCATTAACAGGAACTGCAAAACGTTATTATACAAGTGTATTCATCATGTTCATATGTAGCAGtttcatatataatattgatatatatatttaggaagTGGTGTTAGTTGGGACATTTAACCAGTGAAGGCGATCATCAGTGGTAGGTTTTCTGGGCGGGGTCGCTTCAGTAAAAGTGCGCCCAGTCAGACTGGTCCCTCAGATTGTGCTGTCCATAGTGAAAGCGCACAGCCTGGCACTGGACCCCGCTACCTCTACAGGATGCTCGCTTTCCTTGCTCTGGTCGTGTCCTTGTCCTATGTGGCCGGTGACCGCGGTTGCCCACCCTGCCAACCCAGCCTGTGCGCCCCTCTCCCGGCGGAGGGCTGCCAGCAGGGCACGGTGACGGACCTGTGCGGGTGCTGCTCTGTGTGCGCCGCCGGCCAGGGGGAGCCGTGCGGGGGACGCGGCGGCTCTCCGAAGCGCTGCGGGGCCGGGATGGAGTGCGTGAAGAGCGGCAAGGGGAAGCGGGGGACGTGCGTGTGCAAGAGCGGCTACGAGGTGTGCGGCAGCGACGGGGTGACTTACGGTAATGTGTGTGAGATGAGAGCCGCCAGCAGGAGAGCCGTGGACGGGGAGCAAAGCGAGATCAAGGTGCTCAAAAAAGGCAAATGCGAACGAGCACCTGTTATCGTGACTCCCCCTAAAGAGATCTGGAACGTGACGGGAGCTCAGGTCTTCCTCAGCTGTGAAGCGATAGGAGTCCCGACCCCTGTCCTCGTCTGGAAAAAGATTTTAACTACGAGCAAAGGTGTGGAGAACTTAGAGCTACTGCCCGGGGACCGTGACAACCTGGCCATCCAGACTCGCGGCGGGCCGGAGAAGCACGAGGTGACGGGCTGGGTGCTGATTTCCCCTCTCTCCAAGCTGGATGCTGGGGATTACGAGTGCCACGCCACAAACTCCAAAGGACAGGTATCTGCTGTGGGCAGCATCCACGTGCTCAGGAAGATGAACTGTGAGTCTGTGAGGGGGAGCGTGGGATCAGCAGCAGCACCCCCCCAGGAGAGAGACACTCCTGTCAGCACTGACGCCTGCCCCGAGATCCGCTCCTAAAAACACTAACCCAACTCTCCCTTTAACATATCCACATTGGAGCCATATGTCTTCCACTATACAATATTTAACCtatattccattttattttgtattgtattattatgatagATAACACCTTAAGATGTGCCTCTGTAACGGCTTTCTCTTTGGGAATCAGGTCCCACAATGTAGTGTCTGACTAGTCAAAACAACACTAGGTGCTCTAGCTGTACAGACAAATTGTATTACAGAACCTTAgaacatgataaataaatataaatatcctaGTTATGTATATCTTCTTATTTCTGCTGGTtgaatgttgtgtgtgttatattCTTTGTGGATATTTCCAACCACCTTGTTTGCCACGAATAACAAATCggaataatgaaataataattcaggCCTGAATGAcgggacaaaaataaacatgaccaCTGGAATGACagacaaattatataataatgtgaACATGTTAAGTGGATTTTTTCAGTATTAAGAGGAAACAGGGAAGCTGCCAAGTGTTATACAAGCTCAGGACTTGAAAAGGTTACGATGTCATGTaatcataaaaacacatcacagagAATATTGTTCAGTCTTTCAATTTATAGGTATGTCTGTACACTGGCTTATATTTCCAACAGGTTAGTGTTTTGACCATAGATCATTTCAATGTCATTGTTCAATATAGCACTCATTGAAAactcattttttattaaatctaaGGACTTAAATCACAAAGGACTTATCACTCCTCAATGCTACAGATACAGCACatctatgttaaaaaaaaa

Function

GO: NA

KEGG:

id description
K23580 IGFBP7; insulin-like growth factor-binding protein 7

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017811 True 1955 mRNA 0.47 5 23875123 23884454

Neighbor

gene id symbol gene type direction distance location
AMCG00017804 NA coding downstream 11467 23857838 ~ 23863656 (-)
AMCG00017806 LOC108277608 coding downstream 34960 23821734 ~ 23840163 (-)
AMCG00017808 NA coding downstream 62675 23795913 ~ 23812448 (-)
AMCG00017805 NA coding downstream 114886 23750371 ~ 23760237 (-)
AMCG00017807 NA coding downstream 184687 23671644 ~ 23690436 (-)
AMCG00017812 NA coding upstream 730 23885184 ~ 23893945 (-)
AMCG00017815 tmem33,LOC107741195 coding upstream 164368 24048822 ~ 24053932 (-)
AMCG00017818 limch1 coding upstream 235023 24119477 ~ 24253084 (-)
AMCG00017824 NA coding upstream 556082 24440536 ~ 24568029 (-)
AMCG00017827 LOC107660492,LOC107757584,LOC107700259 coding upstream 706563 24591017 ~ 24596789 (-)
G93173 NA non-coding downstream 335003 23444211 ~ 23540120 (-)
G93165 NA non-coding downstream 545379 23326525 ~ 23329744 (-)
G93159 NA non-coding downstream 578877 23295800 ~ 23296246 (-)
G93092 NA non-coding downstream 579754 23294819 ~ 23295369 (-)
G93090 NA non-coding downstream 584442 23290332 ~ 23290681 (-)
G93324 NA non-coding upstream 23121 23907575 ~ 23910679 (-)
G93350 NA non-coding upstream 150242 24034696 ~ 24037610 (-)
G93355 NA non-coding upstream 159740 24044194 ~ 24046369 (-)
G93399 NA non-coding upstream 416966 24301420 ~ 24301980 (-)
G93434 NA non-coding upstream 620928 24505382 ~ 24505610 (-)
AMCG00017780 LOC101079287,LOC106577738,LOC100690429,LOC105925506,LOC108244244 other downstream 553169 23318093 ~ 23321954 (-)
AMCG00017725 NA other downstream 3516498 20302000 ~ 20358625 (-)
G92591 nansa,LOC108416893,LOC108416857,LOC107723182 other downstream 4455767 19412987 ~ 19419356 (-)
G92436 NA other downstream 5411947 18462784 ~ 18463176 (-)
AMCG00017675 NA other downstream 6085374 17781648 ~ 17789749 (-)
AMCG00017819 NA other upstream 380225 24264679 ~ 24270595 (-)
AMCG00017839 NA other upstream 1061641 24946095 ~ 24949136 (-)
AMCG00017844 frmpd1b,frmpd1,LOC107750435,LOC107570223,LOC107655878 other upstream 1113090 24997544 ~ 25018212 (-)
AMCG00017861 LOC103354863 other upstream 2060687 25945141 ~ 25957648 (-)
AMCG00017866 smim19,LOC107754471,LOC106604684,LOC106611785 other upstream 2128034 26012488 ~ 26015942 (-)

Expression


Co-expression Network