Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00017822 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030131.1 |
| NCBI id | CM030131.1 |
| chromosome length | 33043351 |
| location | 24369729 ~ 24374577 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00017822 | True | 708 | mRNA | 0.54 | 5 | 24369729 | 24374577 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00017816 | NA | coding | upstream | 327623 | 24041513 ~ 24042106 (+) |
| AMCG00017814 | NA | coding | upstream | 334855 | 24026193 ~ 24034874 (+) |
| AMCG00017809 | NA | coding | upstream | 390955 | 23942998 ~ 23978774 (+) |
| AMCG00017813 | NA | coding | upstream | 455558 | 23913680 ~ 23914171 (+) |
| AMCG00017810 | NA | coding | upstream | 460534 | 23894404 ~ 23909195 (+) |
| AMCG00017820 | apbb2 | coding | downstream | 11698 | 24386275 ~ 24392205 (+) |
| AMCG00017821 | apbb2b,apbb2 | coding | downstream | 29276 | 24403853 ~ 24431531 (+) |
| AMCG00017823 | rbm47,LOC107702361 | coding | downstream | 193024 | 24567601 ~ 24577182 (+) |
| AMCG00017825 | pds5a,LOC107757607 | coding | downstream | 276523 | 24651100 ~ 24680134 (+) |
| AMCG00017831 | rpl9,rl9,LOC107700291 | coding | downstream | 352032 | 24726609 ~ 24730164 (+) |
| G93354 | NA | non-coding | upstream | 321961 | 24044178 ~ 24047768 (+) |
| G93241 | NA | non-coding | upstream | 549206 | 23818331 ~ 23820523 (+) |
| G93238 | NA | non-coding | upstream | 555308 | 23813846 ~ 23814421 (+) |
| G93237 | NA | non-coding | upstream | 557281 | 23810025 ~ 23812448 (+) |
| G93236 | NA | non-coding | upstream | 559821 | 23809307 ~ 23809908 (+) |
| G93454 | NA | non-coding | downstream | 251982 | 24626559 ~ 24628418 (+) |
| G93588 | NA | non-coding | downstream | 573414 | 24947991 ~ 24949268 (+) |
| G93651 | NA | non-coding | downstream | 935125 | 25309702 ~ 25312347 (+) |
| G93675 | NA | non-coding | downstream | 1033940 | 25408517 ~ 25409609 (+) |
| G93688 | NA | non-coding | downstream | 1142724 | 25517301 ~ 25517637 (+) |
| AMCG00017817 | phox2b,LOC101065912,LOC106604546 | other | upstream | 257619 | 24108560 ~ 24112110 (+) |
| AMCG00017783 | NA | other | upstream | 1040160 | 23301615 ~ 23329569 (+) |
| AMCG00017745 | NA | other | upstream | 3519112 | 20848356 ~ 20850617 (+) |
| AMCG00017747 | NA | other | upstream | 3547681 | 20799595 ~ 20822048 (+) |
| AMCG00017730 | ppp3ca,LOC107084148,LOC106922390,LOC106958666,LOC102788851 | other | upstream | 4366600 | 19993085 ~ 20003129 (+) |
| AMCG00017829 | smim14,LOC107700293,LOC107757606 | other | downstream | 330693 | 24705270 ~ 24715730 (+) |
| AMCG00017843 | NA | other | downstream | 675732 | 25050309 ~ 25052374 (+) |
| AMCG00017886 | NA | other | downstream | 2618314 | 26992891 ~ 26997452 (+) |
| AMCG00017898 | kcnip4,LOC103360335,LOC100711851,LOC102780455 | other | downstream | 3098304 | 27472881 ~ 27697379 (+) |
| AMCG00017910 | NA | other | downstream | 4257315 | 28631892 ~ 28646750 (+) |
