AMCG00017847


Basic Information

Item Value
gene id AMCG00017847
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 25108891 ~ 25112677 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017847
ATGATGGAGAGATGGGATTCCCTCAGTGCCCAGACTCACGGACAGGCGGTGCTCCGCAGGCTGCAGGAGCAGAGGGTGCTGGGATTGTTCTGCGATGTGACAGTGCTGGTGGAGGGCGGCGTGTTCCCGGCTCACAGGAATGTCCTGTCGGCTTGCAGCGAGGTCCTCCACCACACCCTGAGCCGGGGCGGTGATGTGGTGCAGCTGGACAATGTCAGCCTCCAGAGCTTCTCTCGCCTCCTGGAGTTCTTCTACACCGCGGTTCTGCCCAGCGGCTGTCTGCAGGACTTCTACAGCACCGCGGAGCTCCTGAAGGTCAGTCTGCCTCTGGCTCGGCACTCAGGCAGCCTGTGTAGTGACCGCAGCTCCCTGGCCGCTCCGGACAGACTGAGCCACCGGACTGGGGCAGGGCGGGCAGTGGGCGTTCAGGAGGTGTGTGAGCAACATGACGGGAGCTGTGGAAGGACACAGGCAGGAGGAAACCAGGAGCTACCTCCACATCTCCAGCAGGCAGCAATTGTGGCTTCAGGGCATACTGAGcaaggcacagagagagaggaggaaaaggaCCAGAACCCAGCAGAGCTGAACCCGAGGACGAAGGCGCCCGACACATTCTGTCCTCCATCACTCATTCAGGGGAAGGGAAATGATAATGGAGACAAGTCCTCTCAGACTGGGACAGGACTGGTGCCATCCACAGAGAGCCTTTCTGTGCAGGAAGATCTGCAAAATACACAGGAGGAGAAGGGTGTTAGAAAGGACAAAGAGATTTCATCACCGAAGCTGGTGGACTGCCAGCCCTGGATGTGTGAGGCTTGTGACAGTCACAGCCGCCAGCTGGTTCAGCACAGGAAGCAGTGCCGTGCCGAGAAGACGTACCAGTGTGACCAGTGTGGCAAACAGCTTGGCTCCATGGAGAAGCTAAAGGACCACGTCGCCTACCACTCGGATGCCCGTCCCCATCGCTGCCAGCTCTGTGACAAGGCCTACAAGGTCAAGAATGACCTGACGCAGCACGTGAGAGCCAAGCATGGGGAGGCCTGGAGGGGGAAGCCAGCGCTGGTGCAGCTCTGCGAGTTCTGTGGCCAGGAGGTCCAACACTACAAGAGCCACAAGGTCTTCTGCAGCGGGGTGAAGAGGTTCCCGTGCAGGTTCTGTGTCCAGACCTTCTACCGCCTGTCGGAGCTGAAGAGACACACCTGGACGCACACAGGGGAGCTGCCCTACCGCTGCACAATCTGTGGGAAGCGCTGCCGTCACCCCAGCAACTTGAAGAAGCACATCCGCTCAGTGCACAAAGAGGACGTGCGAGTGCGGATTGACAGGGAACACGCCTCCCCCAAACTCCTGCAGGACTTCCTGCCCCTCGAGCCCAGCGCCTGGACTGGACATCCGTGTCAGAGTGCAGGCTCCTCTGTGCtggccccctctctctccctcaccagGACCACAGCAATAACTCCACTGCCAGGTCCCTCTGCCGTCCACATGGCCCCCACAGCTCTGTCCCCAAACAGCCAGCCACACGCCCAGCCTCCGTCGCCTCCCGGGTCCTCGGCCCAGGGCCCCAGCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017847 True 1578 mRNA 0.61 5 25108891 25112677

Neighbor

gene id symbol gene type direction distance location
AMCG00017848 zbtb5,LOC101168920,LOC101469222,LOC102302739 coding upstream 15553 25082919 ~ 25093338 (+)
AMCG00017842 NA coding upstream 34942 25053194 ~ 25073949 (+)
AMCG00017841 NA coding upstream 135121 24972880 ~ 24973770 (+)
AMCG00017835 NA coding upstream 203114 24887263 ~ 24905777 (+)
AMCG00017830 LOC107598304 coding upstream 350236 24740960 ~ 24758655 (+)
AMCG00017849 pax5 coding downstream 137517 25250194 ~ 25262749 (+)
AMCG00017853 NA coding downstream 161276 25273953 ~ 25299127 (+)
AMCG00017854 LOC107746038 coding downstream 341767 25454444 ~ 25462515 (+)
AMCG00017857 LOC107656869,LOC107548317,LOC100696351,LOC108424164,LOC107709434 coding downstream 445208 25557885 ~ 25574707 (+)
AMCG00017856 LOC107709456,LOC101470744,LOC102789888 coding downstream 501205 25613882 ~ 25625670 (+)
G93588 NA non-coding upstream 159623 24947991 ~ 24949268 (+)
G93454 NA non-coding upstream 480473 24626559 ~ 24628418 (+)
G93354 NA non-coding upstream 1061123 24044178 ~ 24047768 (+)
G93241 NA non-coding upstream 1288368 23818331 ~ 23820523 (+)
G93238 NA non-coding upstream 1294470 23813846 ~ 23814421 (+)
G93651 NA non-coding downstream 197025 25309702 ~ 25312347 (+)
G93675 NA non-coding downstream 295840 25408517 ~ 25409609 (+)
G93688 NA non-coding downstream 404624 25517301 ~ 25517637 (+)
G93733 NA non-coding downstream 837059 25949736 ~ 25950372 (+)
G93734 NA non-coding downstream 838477 25951154 ~ 25951398 (+)
AMCG00017843 NA other upstream 56517 25050309 ~ 25052374 (+)
AMCG00017829 smim14,LOC107700293,LOC107757606 other upstream 393161 24705270 ~ 24715730 (+)
AMCG00017817 phox2b,LOC101065912,LOC106604546 other upstream 996781 24108560 ~ 24112110 (+)
AMCG00017783 NA other upstream 1779322 23301615 ~ 23329569 (+)
AMCG00017745 NA other upstream 4258274 20848356 ~ 20850617 (+)
AMCG00017886 NA other downstream 1880214 26992891 ~ 26997452 (+)
AMCG00017898 kcnip4,LOC103360335,LOC100711851,LOC102780455 other downstream 2360204 27472881 ~ 27697379 (+)
AMCG00017910 NA other downstream 3519215 28631892 ~ 28646750 (+)
G94275 NA other downstream 4320735 29433412 ~ 29450347 (+)
AMCG00017978 NA other downstream 5707192 30819869 ~ 30831867 (+)

Expression


Co-expression Network