AMCG00017851


Basic Information

Item Value
gene id AMCG00017851
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 25095198 ~ 25100631 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017851
cTGCTCTGCATTGGCCGCTGTTGCACGGCAGCGCGGAGGACACCAGGGGGCGCTCTGCTCTCCTGCAACACACGTCTGCACACGGCGCTGCGCACGCCTGCGGGACTGGAGCCGGGGCTCACACTTACAGTTGCTTTCATTTTCTGCGTCCTTGACAGAAGTGTTTGCTTTTGAGTGCATTGGGCTGAGCATCGTTTGCGCCGTAATGAAGGCCGCTCGGCAGCTCCTGAAGGTGTTTGTGACCAGAAGGATTCCCCAGGAAGGACTGAAGGCGCTGTCTCTTTCTGGACTTTGTGATGTCCAGCTGTGGGACTCTGATGAACCTGTGCCCAAAGATGAGTTACTGAAAGGAGTGTCAGGGGCACATGGACTCCTCTGTCTTCTCTCGGAAAAGATTGATCAGGAAGTCCTGGATGCAGCAGGCATGTTGTCTCGACGACCCAATCTGAAAGTGATCAGCACACTCTCTGTTGGCTTTGACCACCTTGCCATCGACGAGATCAAAAAACGGGGTGTAAGAGTGGGCTACACCCCCGATGTGTTGACGGATGCCACCGCTGAGCTCACTGTGGCTCTCCTACTGGCCTCATCGCGCAGGATCCCAGAGGCAGTGGAGGAGCCCCTCTGGCTGTGCGGCTATGGTCTGTCTGAGAGCACGGTGGGCGTCATTGGTCTCGGACGAATAGGTTTGGCCATTGCCAAGAGGCTAAAGCCCTTCGGGGTAAAGAATCTGCTCTATTGGGGGCGCGCGGCCAAACCAAAGGCGGCAGAGGTGGATGGGGAGTTTGTGCCTTTGGACAGACTACTCGAAGAGTCCGACTTCGTGGTCGTGTCTTGTGCTCTGACACCTGAAACTCAGGGACTGTGCAACAAGGCCTTCTTCACCAAGATGAAGAAAACCGCCGTGTTTGTCAATTCCAGCAGaggcaccgtggtgaaccaggaGGACCTGTATGAGGCTCTGTCCAGCGGGGAGATTGCAGCCGCTGGTCTGGACGTCACCACCCCCGAGCCCCTGCCCACTGACCACCCACTGCTCAAGCTGAAGAACTGTGGCAGCGCCACATACTCCACGAGAGAGACCATGTCTGTGCTGGCAGCCAATAACCTCCTGGCAGGGCTGACGGGGGGGAAGATGCCAAGCGAGCTCTCTCTGTGA

Function

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0051287 NAD binding molecular_function
GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor molecular_function

KEGG:

id description
K00049 GRHPR; glyoxylate/hydroxypyruvate reductase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017851 True 1159 mRNA 0.57 9 25095198 25100631

Neighbor

gene id symbol gene type direction distance location
AMCG00017846 NA coding downstream 14767 25075605 ~ 25080431 (-)
AMCG00017845 NA coding downstream 108426 24965474 ~ 24986772 (-)
AMCG00017837 ints10 coding downstream 152565 24928171 ~ 24942633 (-)
AMCG00017836 NA coding downstream 176372 24903782 ~ 24918826 (-)
AMCG00017840 klhl5,LOC107656383,LOC107565971,LOC108412945,LOC107746020 coding downstream 256051 24799083 ~ 24839147 (-)
AMCG00017850 NA coding upstream 202 25100833 ~ 25105142 (-)
AMCG00017852 NA coding upstream 15307 25115938 ~ 25224281 (-)
AMCG00017855 NA coding upstream 246189 25346820 ~ 25366550 (-)
AMCG00017862 dnah6 coding upstream 722345 25822976 ~ 25923225 (-)
AMCG00017867 LOC107754176 coding upstream 932484 26033115 ~ 26049947 (-)
G93591 NA non-coding downstream 144950 24949968 ~ 24950248 (-)
G93576 NA non-coding downstream 168010 24922467 ~ 24927188 (-)
G93509 rl9,rpl9,LOC107562595,LOC107700291 non-coding downstream 364976 24725938 ~ 24730222 (-)
G93500 NA non-coding downstream 415298 24677165 ~ 24679900 (-)
G93434 NA non-coding downstream 589588 24505382 ~ 24505610 (-)
G93639 NA non-coding upstream 6171 25106802 ~ 25107082 (-)
G93641 NA non-coding upstream 10259 25110890 ~ 25111090 (-)
G93660 NA non-coding upstream 272302 25372933 ~ 25381038 (-)
G93689 NA non-coding upstream 416655 25517286 ~ 25517600 (-)
G93718 NA non-coding upstream 708913 25809544 ~ 25809853 (-)
AMCG00017844 frmpd1b,frmpd1,LOC107750435,LOC107570223,LOC107655878 other downstream 76986 24997544 ~ 25018212 (-)
AMCG00017839 NA other downstream 146062 24946095 ~ 24949136 (-)
AMCG00017819 NA other downstream 824603 24264679 ~ 24270595 (-)
AMCG00017780 LOC101079287,LOC106577738,LOC100690429,LOC105925506,LOC108244244 other downstream 1773244 23318093 ~ 23321954 (-)
AMCG00017725 NA other downstream 4736573 20302000 ~ 20358625 (-)
AMCG00017861 LOC103354863 other upstream 844510 25945141 ~ 25957648 (-)
AMCG00017866 smim19,LOC107754471,LOC106604684,LOC106611785 other upstream 911857 26012488 ~ 26015942 (-)
G93795 shisa3,LOC102786300 other upstream 1003395 26104026 ~ 26107805 (-)
G93796 NA other upstream 1008429 26109060 ~ 26110074 (-)
AMCG00017902 NA other upstream 2737620 27838251 ~ 27839790 (-)

Expression


Co-expression Network