AMCG00017855


Basic Information

Item Value
gene id AMCG00017855
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 25346820 ~ 25366550 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017855
ATGGAAGGTGGTGGGGAGGACAAGAAGGGACGGGACGGGAGAGGGAGGAGTGGCTCAGGACTCCTGAATGTTGGGAGCACTGCAATTTCTGCAAACAACATTGTCAACACCTTTTATAAACCGACGTTTGATGAAAAAGAGATGTCTGCAGACAACGCTGAACTCCTCAAGCACTATGACTTGTATGAAACCATTGGCACAGGTGGGTTTGCAAAAGTAAAGCTCGGACGGCACATTCTGACGGGAGAAAAAGtagcaataaaaataatggaCAAGACTGAGCTGGGGGATGATTTACCCCGCGTGAAGACTGAGATTGAAGCCATGAAGAACCTCAGTCATCAGCATATATGTCGTCTGTACCACGTTATAGAGACATCGAAGAAAATATTCATGGTCCTTGAGTACTGCCCCGGAGGAGAACTGTTCGACTACATCATTGCCAAAGATCGTCTGTCGGAAGAAGAAACTCGCATATTCTTCCGCCAGATTGTATCGGCACTGGCTTATGTGCACAGCAAGGGCTACGCTCACAGGGACCTCAAACCGGAAAATCTGCTCATTGATGAAGACCATAATCTTAAACTGATTGATTTTGGTTTGTGTGCAAAGCCAAAGAATGATGGGATTGCTTTAATCGCCCTAACCCTAGTAAGTCTTGTGTTGCAGGGCGGTCTGGAATACCATCTGATGACATGCTGTGGCAGCCCTGCATACGCAGCTCCCGAATTAATTCAAGGCAAGGCTTATATCGGCTCAGAGGCGGATGTGTGGAGTATGGGCGTGCTGCTGTTCGCTCTGCTGTGTGGGTACCTGCCCTTCGATGACGACAACGTCATGATTCTGTACAAGAAGATAACGAGGGGACAGTACAACAATCCTTCATGGCTTTCACCGGGCAGCATCCTGCTTCTCAATCAGATGATGCAGGTGGACCCTAAGAGACGCATCACAGTCAAACATCTTCTGAACCATCCCTGGCTGATGCAGGGCTACTCCAGCCCGGTCGAATGGCACAGCAGGGTACCTCTTGGCCACATTGATGAGGACTGCATTACAGAGATGGCCGTGTGCCTCAAGCGTTCAAGACCAAGCATGACTGACCTGGTCTCAGAATGGAGCTACAGCCATATCACCGCCATATACCTCCTGCTGCTGGCGAAGAAACTGCGAGGGAAGCCAGTGCGACTGAGACTCTTGCCTGTGGAGTCGGGCACTTCCACGCCTTTCAAAGACTTGAAGACCAAGAAAAACCTGAACTTTGGCCAAGATGAAGAGAGTGCCGAGATCCCTCTGGTCTTCTGTTCCATGGATTTTGCTGAGGAATGTGCCTTTGATGAGCCCCCGAGTTCCCCACTCACGCAGAGACTTGAGAAGagaTCAAAATGTCAATCCATGTTTGAGGATGTCAATGTAGAGCTTCCAACTCCCACTAAGGAGAGGGTACGCtccaaaaacaaggaaaacaaggaGAATATAATCGACGGGTCTTCCAACAAGAAGACTGACGCTTTTGCCCTGCCGGCACCTAGGACACCTTACAACAAGAGAAACCCAAGAACGCACAAAACTCCTAATCACAACACTTCTGTGGGCAATAAAGTTAGTAACTCGACCAAGGAACCCTCCCAGAAGAAATGCCCAGACCAGACGAACATGGATGAGCTTGCAGTGTTGACTTTCAGTCCAGAGCGGAGGTCCCGCTCTCTAGACATGGAAGTGAATCAGGCACAGATGGACAGCGCGCAGAAGAGGAAAGGCACCAAGGTGTTCGGGAGTCTGGAGAGAGGCTTGGACAAGATGATCACCATGTTGACTCCCAACAAGAAGAGAGGGCTGAGGGACGGCCCTCGGAAAATCAAGGCAATGTACAATGTCACTTTAACAAGCCAGGTCCACGCAGAGCAAGTCTTAAATCAGATTATCAGCATCCTTCCACAGAAGAACGTTGACTTTGTACAGAAGGGATACACCCTGAAGTGTAAAACCCAGTCTGACTTTGGCAAGGTCACCATGGCGTTCGAGCTGGAAGTGTGTATGCTGAGCAAGCCGGAGGTGGTGGGCATCCGCAGGCAGAGGCTCAAGGGAGACGCCTGGGTTTACAAACACTTAGTGGAAGATATACTGTCCACTTCCAAAGTATGACGGACATCTTGTTCGGGAGGGGAGAAAAACGTCAATACGCATTTCAGCATTACCCTAATTACAGATAAAACCTTAACATGTACAAATTTTAAGTCTTAAACCTAATGTTcacaattttgttgtttttatcatgtGTGCATTCCTCtgatatttctgtgtgtgtgtctcctatTCTGTCCAGTCTTCACAATCTGCCTTctgaacagattttaaatgaataaattccTAGCTTCTTTGCCAATGTGTACAAATTCAACTGACATTTACAGGGTCCGTTGGCTGTCGAGGCCGTCCAGGATCTCATTTGCAGCCTCTGCTTTAGCCGCGTCGCCATCATCGCAAAGGGACGGCACATTTCCTTCCCACATGGGCAGCCTTTCATTTGCATAACTTTGCTCCTGTCTGCGATTTAAGTAGGATTTATGTGGGTCATTAAGTAAGTCACAGCTGTGGTTACCAGAGTTAAACTTTATGTCCAGTAAAATGAGGTTGATTAAAATGACTGCCTCATCCTGGTGCAATCTCATTTAGCTGCTTTGATAATGTAACAAACGCCAGCCCTCGCCCGGCTCTCCGGCACACATCCGGCCTAATTCCGTCACAGCGAGGGAGACGCATTCTGCACTCTGGACTGTTCTCCGTGAGGCTAATTAATTGCCCTTTATTGCATGCGAGCTGCCAGCGTACCCAATTATAACTCATTTAGACATTAGCGCTTTCTCTTCAGAAATGGCTGTTTTTCAGAAACCTATGGaaaatgaaagttttttttcttctgaatcaGTATTTAAAGCCACAACTTACCTTCACCTTCGATTGAATCCACTTCTTCCTCTGTGACCCCCCtacccaccaccaccaccaccaaacaTCCACTGGCAGAGCTGGTGCCAGAGCACATTGAAAAGCGGGACCAGCCGCTGCCGGTCAAAACTCTGCTCCGCTCCCCGGCCTGCCCCGGCCTGCCCCGTCCCCCCTGCTCTCTGTATGTTTTAAACTCCTTCAATAAATCAATTGCACTTAA

Function

GO:

id name namespace
GO:0018108 peptidyl-tyrosine phosphorylation biological_process
GO:0048821 erythrocyte development biological_process
GO:0043065 positive regulation of apoptotic process biological_process
GO:0008016 regulation of heart contraction biological_process
GO:0046777 protein autophosphorylation biological_process
GO:0061351 neural precursor cell proliferation biological_process
GO:0005938 cell cortex cellular_component
GO:0016020 membrane cellular_component
GO:0005509 calcium ion binding molecular_function
GO:0000166 nucleotide binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function
GO:0004715 non-membrane spanning protein tyrosine kinase activity molecular_function

KEGG:

id description
K08799 MELK; maternal embryonic leucine zipper kinase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017855 True 3169 mRNA 0.48 19 25346820 25366550

Neighbor

gene id symbol gene type direction distance location
AMCG00017852 NA coding downstream 122539 25115938 ~ 25224281 (-)
AMCG00017850 NA coding downstream 241678 25100833 ~ 25105142 (-)
AMCG00017851 NA coding downstream 246189 25095198 ~ 25100631 (-)
AMCG00017846 NA coding downstream 266389 25075605 ~ 25080431 (-)
AMCG00017845 NA coding downstream 360048 24965474 ~ 24986772 (-)
AMCG00017862 dnah6 coding upstream 456426 25822976 ~ 25923225 (-)
AMCG00017867 LOC107754176 coding upstream 666565 26033115 ~ 26049947 (-)
AMCG00017869 NA coding upstream 710178 26076728 ~ 26082767 (-)
AMCG00017870 NA coding upstream 729890 26096440 ~ 26097928 (-)
AMCG00017872 atp8a1,LOC107550857 coding upstream 745563 26112113 ~ 26193833 (-)
G93641 NA non-coding downstream 235730 25110890 ~ 25111090 (-)
G93639 NA non-coding downstream 239738 25106802 ~ 25107082 (-)
G93591 NA non-coding downstream 396572 24949968 ~ 24950248 (-)
G93576 NA non-coding downstream 419632 24922467 ~ 24927188 (-)
G93509 rl9,rpl9,LOC107562595,LOC107700291 non-coding downstream 616598 24725938 ~ 24730222 (-)
G93660 NA non-coding upstream 6383 25372933 ~ 25381038 (-)
G93689 NA non-coding upstream 150736 25517286 ~ 25517600 (-)
G93718 NA non-coding upstream 442994 25809544 ~ 25809853 (-)
G93802 NA non-coding upstream 891546 26258096 ~ 26258367 (-)
G93816 NA non-coding upstream 986967 26353517 ~ 26353724 (-)
AMCG00017844 frmpd1b,frmpd1,LOC107750435,LOC107570223,LOC107655878 other downstream 328608 24997544 ~ 25018212 (-)
AMCG00017839 NA other downstream 397684 24946095 ~ 24949136 (-)
AMCG00017819 NA other downstream 1076225 24264679 ~ 24270595 (-)
AMCG00017780 LOC101079287,LOC106577738,LOC100690429,LOC105925506,LOC108244244 other downstream 2024866 23318093 ~ 23321954 (-)
AMCG00017725 NA other downstream 4988195 20302000 ~ 20358625 (-)
AMCG00017861 LOC103354863 other upstream 578591 25945141 ~ 25957648 (-)
AMCG00017866 smim19,LOC107754471,LOC106604684,LOC106611785 other upstream 645938 26012488 ~ 26015942 (-)
G93795 shisa3,LOC102786300 other upstream 737476 26104026 ~ 26107805 (-)
G93796 NA other upstream 742510 26109060 ~ 26110074 (-)
AMCG00017902 NA other upstream 2471701 27838251 ~ 27839790 (-)

Expression


Co-expression Network