AMCG00017876


Basic Information

Item Value
gene id AMCG00017876
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 26283965 ~ 26407993 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017876
aTGAAGAAGCAAAAATCAGGACCAGCTCTGAGGACTGTATCTCCAAAACAGGATTGTGAGGAGAGGAAGCAGGAGAAACTCCCAGACAAGGAGAGCGAAAGTGGAACATCCCTCAATGAACTTTCCTCCTCCAGTTCCGAGACCCATTCAGAGATCACGACGCCGCTGGACGGGGTCAGCTGCGCCCCTGTGCAGTCCTCGTCCCGGCAGCCAAGCACACTAACCCTGGACAGGCCCTCAAAGAAGGTCTCCGTGCAGTGGATGCAGCTGCCGGACAAGCGGAGGAACAGTGAACTGTTCCAGTCATTGATGAGCAACCCTCGCGAGACCAATCTCAACAAAAAGAAAGTGACAGAGAAGCTGAGCGTGGAAGAAGAGATGAAACAGGAAATGTGTCCCGAGTTCTCGGTTCCGGTCCTGATCCCATCCACGCCCCCCGCCGACCCAGAGGTCCCAGTCCCGTCAGCGTCTGTTGACCCAGAGGTTCCGGTCCCAGTTCTGGTCCTGTCTATCCAGCCCGAGGTCTCGGTTGTTGTTGCCGCCCAGCCCGAGTgcccggccgccgccgccgccgcccagCCCAAGTGCCCGGTCGCCACCACTGCTGCCCCAGTTCCGGTCCCGGCCGCCACCGTCCAGCCGGATGCCCCAGTTACTGTCCCGGCAGCCGCCGTCCAGCCGGATGCCCCAGTTACCGTCCCGGCCGCCGCCGGGCAATTCTGA

Function

GO: NA

KEGG:

id description
ko04514 Cell adhesion molecules

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017876 True 723 mRNA 0.61 4 26283965 26407993

Neighbor

gene id symbol gene type direction distance location
AMCG00017872 atp8a1,LOC107550857 coding downstream 90132 26112113 ~ 26193833 (-)
AMCG00017870 NA coding downstream 186037 26096440 ~ 26097928 (-)
AMCG00017869 NA coding downstream 201198 26076728 ~ 26082767 (-)
AMCG00017867 LOC107754176 coding downstream 234018 26033115 ~ 26049947 (-)
AMCG00017862 dnah6 coding downstream 360740 25822976 ~ 25923225 (-)
AMCG00017877 kctd8,LOC107589145,LOC107758511,LOC107678642,LOC107559281,LOC107706921 coding upstream 29768 26437761 ~ 26439111 (-)
AMCG00017874 NA coding upstream 36425 26444418 ~ 26452343 (-)
AMCG00017875 guf1 coding upstream 50225 26458218 ~ 26467868 (-)
AMCG00017878 si:dkey-155h10.3,LOC107569420,LOC107747559,LOC107667066,LOC107666522 coding upstream 234389 26642382 ~ 26650068 (-)
AMCG00017879 NA coding upstream 269264 26677257 ~ 26708132 (-)
G93802 NA non-coding downstream 25598 26258096 ~ 26258367 (-)
G93718 NA non-coding downstream 474112 25809544 ~ 25809853 (-)
G93689 NA non-coding downstream 766365 25517286 ~ 25517600 (-)
G93660 NA non-coding downstream 902927 25372933 ~ 25381038 (-)
G93641 NA non-coding downstream 1172875 25110890 ~ 25111090 (-)
G93843 NA non-coding upstream 90921 26498914 ~ 26499177 (-)
G94008 NA non-coding upstream 1354693 27762686 ~ 27767331 (-)
G94012 NA non-coding upstream 1371044 27779037 ~ 27784050 (-)
G94060 NA non-coding upstream 1685475 28093468 ~ 28097158 (-)
G94073 NA non-coding upstream 2011923 28419916 ~ 28420262 (-)
G93796 NA other downstream 173891 26109060 ~ 26110074 (-)
G93795 shisa3,LOC102786300 other downstream 176160 26104026 ~ 26107805 (-)
AMCG00017866 smim19,LOC107754471,LOC106604684,LOC106611785 other downstream 268023 26012488 ~ 26015942 (-)
AMCG00017861 LOC103354863 other downstream 326317 25945141 ~ 25957648 (-)
AMCG00017844 frmpd1b,frmpd1,LOC107750435,LOC107570223,LOC107655878 other downstream 1265753 24997544 ~ 25018212 (-)
AMCG00017902 NA other upstream 1430258 27838251 ~ 27839790 (-)
AMCG00017906 elavl2 other upstream 1690912 28098905 ~ 28144589 (-)
G94172 NA other upstream 2466168 28874161 ~ 28875923 (-)
G94238 pla2g12a,LOC108263807,LOC102792247 other upstream 2861242 29269235 ~ 29273168 (-)
AMCG00017972 dcaf10 other upstream 4177736 30585729 ~ 30596417 (-)

Expression


Co-expression Network