AMCG00017893


Basic Information

Item Value
gene id AMCG00017893
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 27415574 ~ 27426232 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017893
CAGGAAGAGGCGAACAATAAGACATTCTGGAGGAAGATGTGCAAGCGCTGGACAGTGACTGACCGATAATAACAGCAGATGTGCGCCGCATGAGCATGGGAAGGACTCATCTAACCCGCCAGCGGCTTGTTGCTCAGTGAAAGGCCGCGTCTCACGCTTTTCAGAGCTGTATGGGTGCGGGCTGGGGGCCCGAGGTGCGCGCAGCTGCTCAATGGGGAACTGCTGGGCTTGGTGCTGCGGGGTGTTCAGAAAGGAAACTAACCGCAtccagagaggaggaggGTCCAAATACTTTCGAACTAGTTCCACTGGAGAACACTTTACCATAGAGTTTGAAAACCTTGTAGAGAGCGATGAGGGTGAGAGTCCAGGAAGCAGCCAGAGAGTGTTAAGTGAAGATGAAATCGTACACCTCAAGGAGCAGCGCTATAACGCCATTACAGACAAACAGAAGGCGGTTGATGAAAAACTTAAATCTGAGTTAGCTGCACAAGAGGAGAAGTTAAGGATAGAAGAGGAGGCTTTTTATGCCGCCCAGCGTGAAGCAGCCAGGGCAGCCAAACAGAGAAAGCTGCAGGAGCAAAGGTTCCAGAAGGGCCGAGTGAAGAGAGAGACGGGTGGCGGTGCAGACCATCACAAATCGTTAGCAGCAGGAGAAGATTTTGAGACGTATCTGCAAAATGTCAGGGCTCAGTCTGAAGCCTTCAGAAGCAGTCGAGTCTCTTCCGAGGCGAACGAGGCGACTCCGAACACGGAGAGCAGTTGCGACTTCACCAGCAAGACCCGCTCCACCAACGACGACGGCACCTCGCTGGACCTGGAGTGGGAGGACGAGGAGGGCATGAATCGGATGATACCCGTCCGGGAACGATCCAAGACCGAGGAGGACATCCTGCGCGCCGCTCTCCGGCCTGCTAGCAAACACACGGGCAGCAACCTCACCTCGGCCTCCGACGACtccaatgtcctggagtgggaAAATGACTTTGTGGGCGTCCATATAGAGGAAAACGGCAACTCCGAATATGCAGGATTTGTCAACCCCGTCCTCGAGACATCCTCTGCGGACACGGAGATATCCAACTCTGAAAAGCAGGACAGATAGTTGGAGATGAACGGCGGCGCTCTGACCAAACCCGATGaacttaaaaacattatatatttacaaatcttTGGTTCATGCTTTTCTGTCacttttttattagtagtagaataTTTCGCCGTTTCTTGCAGGCGTGGCGGTGGGTGGGTGGGTTGTCTTGGATGTTGccttcacttttattttatttccgaATGGGCGAATGTTTTATGTACAGTTATCATGAATTAAGTGCAATTTGTAGATCACCTTGATCTTTTGTTAACTCATCCACCTTTGATTGTCGAAACAGCATTGACATCACACTTATACAGCTGAATTAGGTCTATACTGTACATCTATAACACTACTGTTTATGCAAGCAATTCTTTAACGCAGGCGTGGACTCGGAGGCGAAGACAATATTAGCACTGTCACTAAATCGACCACACAACACCGAAGCATAGCTGCCCAGTGACACTAATGTGTTGGATGTTTCCATCACCAGCCTTCTGCAGGAAACATGGTACATATCCACACCAGAGTTATCAAGAGCATTAAAATactcattaaaatgtgaaaatctaaTCTTTTGTATCCTGATGATTTGATattaagatgtatttaattcagGGAAGTAGGTTTAGTTTAGCTGTGCTCTTTCACGCAGACAATTTTCAGTCATTGATTTTTAACACTGGATTTGTCAAATAGACCTCCTGTACATATTTACGGTGTTTTTCGCTTTTAGGCAGATGGGAGTCTTCTCTTTCACCAACATGCATTGGTTTGAATCTTTTTAAACTGAAGGTGTGAAAGTTTCCTTTAAAAGCATGCCATCAGCTCCAAATCATGACAATTGGGAGAGTTAATTACCAAAGTATAACTTAAAGATTTGCCACACAAGCCACTTTCTCCTTCATATAAATCACCCTCGTTTCAGACCTTGTCATCAGCCGCAGGACTGCAAGGCTTCAAACTCGAGGTGACGACgtatattaaaacataaccGCATACTTTTTCTCTTCAAATAGGTTGTCATCGATGAATATTTGAGCAGCTTATGGATAAACAAATCAGAATGTTGACCCGATTTctgttaaaatcaatacaatatttattaagaGAGGAATTTAAGATGAAGGGTCTGTGAGCTGGCACATTAAGGTCCACTTGAGTTTCATCTGAAACATGTTCAAGCATTCCTTCATTAGACACACAAAATTGCTTACTGGTACAGTAGGCTTGAAGATTTTCTACCTCTGCTTTCTCCTTCTGGGTCAACACTGTCACAAGTGGATCCTGGGAATAGTTTTAGGACTCTGCTTAGCAGAAGGCGTTAGTGGACATTTGCAACACTCGCAGATGGTCCCTGCTCTGTGATTACCCAGCTGGCTtgtaaagaaaaagtaaaatccaGGTTATTGCACTCATCTGCTCTCAGAACCAGAAGGTCCTATAGATAAATCAAAAGATGCATCCCAGGATGTATTTGTTTGCCTTTGGGTCTTCACAGTGTTTCCACAGTCTTCGCTTGTTCACTGTCAGTTACCACAGTCCTTGTCTGGAGTGAGAAAGAAGGGTTAATGGACGATGAAGGAAtaggtttaaaatatacatactgCATTCTCAGCTGTGTGAGAAAATACTTTGAAGTGCGTTTATCTGTTgaccaaagaaaataaagatcaaaGATCAGCTGTAAACGTGTGTGTGTCCCAGCTGGCTGCTGgttctgaagatattttaaaatctctgtCAAGTCCAACTTCtgagctgtatttatttttgttgaatgtCTGTTGTACTAACTAGAtgaacaaaccttttttttttgtcagtattGATTCCTGAACCAGGGCTTTTTGATCCAAGTAAAAGCACAATTAACATCACTTGTGCATAAATCTCTTCAGGTTTGCAAACTGTCAAAATCACAGgttgtttatttacaaacacTTAAAGTCATTATTCAGACACTTGTTCCTATACTGAGAATGTCATCATGCTGCTATAAAGCAgaatgttcttgtttgttttttgactgACTTGGAtgacaatttttgttttttattcctccATAAGTAAAACATCTTAAGAAATGAACTGGCCTTCAAGTGTATTCAAATAAGGATGTTAACTTGAATTCTAGAATGTGATTTTGACTATCATACTACATACTCcttattttgcattataataAATGCAGGAAGGTGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017893 True 3296 mRNA 0.43 10 27415574 27426232

Neighbor

gene id symbol gene type direction distance location
AMCG00017894 NA coding downstream 7017 27400504 ~ 27408557 (-)
AMCG00017896 NA coding downstream 19914 27368219 ~ 27395660 (-)
AMCG00017891 NA coding downstream 105429 27290553 ~ 27310145 (-)
AMCG00017887 mk1i1 coding downstream 423316 26988294 ~ 26992258 (-)
AMCG00017884 dapp1 coding downstream 429735 26978060 ~ 26985839 (-)
AMCG00017895 NA coding upstream 1247 27427479 ~ 27432576 (-)
AMCG00017899 NA coding upstream 272669 27698901 ~ 27723731 (-)
AMCG00017903 NA coding upstream 415980 27842212 ~ 27844771 (-)
AMCG00017907 NA coding upstream 1007800 28434032 ~ 28443288 (-)
AMCG00017908 NA coding upstream 1031464 28457696 ~ 28457938 (-)
G93843 NA non-coding downstream 916397 26498914 ~ 26499177 (-)
G93816 NA non-coding downstream 1061850 26353517 ~ 26353724 (-)
G93802 NA non-coding downstream 1157207 26258096 ~ 26258367 (-)
G93718 NA non-coding downstream 1605721 25809544 ~ 25809853 (-)
G93689 NA non-coding downstream 1897974 25517286 ~ 25517600 (-)
G94008 NA non-coding upstream 336454 27762686 ~ 27767331 (-)
G94012 NA non-coding upstream 352805 27779037 ~ 27784050 (-)
G94060 NA non-coding upstream 667236 28093468 ~ 28097158 (-)
G94073 NA non-coding upstream 993684 28419916 ~ 28420262 (-)
G94074 NA non-coding upstream 998800 28425032 ~ 28425243 (-)
G93796 NA other downstream 1305500 26109060 ~ 26110074 (-)
G93795 shisa3,LOC102786300 other downstream 1307769 26104026 ~ 26107805 (-)
AMCG00017866 smim19,LOC107754471,LOC106604684,LOC106611785 other downstream 1399632 26012488 ~ 26015942 (-)
AMCG00017861 LOC103354863 other downstream 1457926 25945141 ~ 25957648 (-)
AMCG00017844 frmpd1b,frmpd1,LOC107750435,LOC107570223,LOC107655878 other downstream 2397362 24997544 ~ 25018212 (-)
AMCG00017902 NA other upstream 412019 27838251 ~ 27839790 (-)
AMCG00017906 elavl2 other upstream 672673 28098905 ~ 28144589 (-)
G94172 NA other upstream 1447929 28874161 ~ 28875923 (-)
G94238 pla2g12a,LOC108263807,LOC102792247 other upstream 1843003 29269235 ~ 29273168 (-)
AMCG00017972 dcaf10 other upstream 3159497 30585729 ~ 30596417 (-)

Expression


Co-expression Network