AMCG00017895


Basic Information

Item Value
gene id AMCG00017895
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 27427479 ~ 27432576 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017895
ATGGAAGAACCATCCACTTCAACAAGCGTTCAGAGGTGCACCATGGGGAGCACAATGAGTGCCACGACCCGCTCGGTATATTACGAGCTGATGTTGGAAGGGCAGGTGTGCGATGTGGTGATAATGGTGGAGGGCACAGCATTCAATGCCCACAAGATCATCTTGTGTGGCTGCAGCGACTATTTCCGAGTCCTGTTCACCAGCGCTGGCTGGaacacagagaggagggaggtcAACATCCCCAGCGTCTCCCCAGAGATGATGAAACTCATCATCCAGTATGCCTACACCCTCGCTGTACCCATCTCCCCCAACAATGTGCAGGAGCTATTGGTAGCGGCCAATCAGTTGGCAGTGCTGGGTCTCCTGCGAATCTGCTGCAACTTCCTGGAGGCGCAGCTGTGCATTGAGAACTGCATCGGCATCTCCCAGTTCGCCGAATTGCACTTCTGCACCGATCTCCATCGGGTTGCCCAATGCTACGTCCGGCACCACTTTGAACCTGTGGCCAAGGCCTGCGAGGAGTTCCTGGCGCTCTCTCTGGACCAGCTAATTAGCATCATCGAAAAGGACGACCTCAACGTCAAGGAGGAGGACGTGGTCTTTGAGGCCATCCTGCGCTGGATCGACCACGCTCCCAGCGAGCGGCGCTGCCACATCTCCGTCCTGCTGCCCAAGGTGCGGATGGCACTCATGGAGTCAGAATACTTCATGACCAAAGTGAAGAACAACGAGCTGGTGAAGCAGACCGATGAGTGCAAGCCTATCGTCATCAATGCGCTCAAGGCCATGTACGACCTCAACATGAATGGCCAGTCTGACTTGGACTTCTGCAACCCCATGACCCGGCCGCGGCTTCCCTATGCCATCCTGTTGTCGATCGGGGGCTGGAGTGGTGACAGCGCAACCAATGGTATGGAGGCCTACGACTGCAGGTATAACCAATGGGTGGATGTCACCATCCCAGAGGAGAGACCACGGGCCTACCATGGGGTCGCCTACCTCAAGGGCTGGGTGTACTGCGTGGGCGGCTTCGACGGCGTGGATTACTTCAGCAGCGTGCGCAAGTTCGATCCTGTGGCGTACACTTGGCTTGAGGTAGCCCCCATGCACTACCAGCGCTGCTACGTCAGCGTGGTTGTGCTGGACGGCTTCATCTACGCCATGGGGGGCTTCAACGGCGATGTGCGGCTCAACACAGCTGAGCGCTACAAGCCCAAGACCAACCAGTGGACCCTGATCGCACCCATGAACGAGCAGAGGAGCGACGCCAGCGCTACCACCCTACACGGCAAGGTGTATATCTGCGGGGGATTCAACAGGAACGGGTGTCTCTGGACATCAGAAACGTACAGCCCAGAGACCAACCAGTGGACTGCCATCGCCCCCATGTTGAGCAGGCGCACCGGGGTGGGCGTGATTGCCTTTGAGGACCACGTGTATGCGGTGGGTGGCTGTGACGGGACGAACCGGCTGCAGACCGTAGAGGCCTACAACCCGCTGACCAACAGCTGGCGCCCAATACCCAGCATGTTCGTCACGCGCAGCAACTTCGGCATTGAGGTGGTGGAAGACCGCTTGTTTGTGGTGGGCGGCTTCAATGGCATCACCACCACTGCCTCTGTGGAGTGCTATGAAAGAGAGGCAAACGAGTGGTACGATGTTTGTGACATGAGTTTCAACCGCAGCGCACTCAGCTGCTGTGTGCTGCCAGGGCTGCCAAACGTGGCCGACTACGCCGTCCCCCGAGATGCCCTGCTGCTCGACTCTCAGCAAGAGGACACACCCTCCTACACCTACAGCCTTCCCTCCTTACCGTTCCCAGACTATCATTAA

Function

GO: NA

KEGG:

id description
K10448 KLHL10; kelch-like protein 10

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017895 True 1836 mRNA 0.58 5 27427479 27432576

Neighbor

gene id symbol gene type direction distance location
AMCG00017893 NA coding downstream 1247 27415574 ~ 27426232 (-)
AMCG00017894 NA coding downstream 18922 27400504 ~ 27408557 (-)
AMCG00017896 NA coding downstream 31819 27368219 ~ 27395660 (-)
AMCG00017891 NA coding downstream 117334 27290553 ~ 27310145 (-)
AMCG00017887 mk1i1 coding downstream 435221 26988294 ~ 26992258 (-)
AMCG00017899 NA coding upstream 266325 27698901 ~ 27723731 (-)
AMCG00017903 NA coding upstream 409636 27842212 ~ 27844771 (-)
AMCG00017907 NA coding upstream 1001456 28434032 ~ 28443288 (-)
AMCG00017908 NA coding upstream 1025120 28457696 ~ 28457938 (-)
AMCG00017909 cxxc4,LOC103148507,LOC106610359 coding upstream 1136384 28568960 ~ 28569655 (-)
G93843 NA non-coding downstream 928302 26498914 ~ 26499177 (-)
G93816 NA non-coding downstream 1073755 26353517 ~ 26353724 (-)
G93802 NA non-coding downstream 1169112 26258096 ~ 26258367 (-)
G93718 NA non-coding downstream 1617626 25809544 ~ 25809853 (-)
G93689 NA non-coding downstream 1909879 25517286 ~ 25517600 (-)
G94008 NA non-coding upstream 330110 27762686 ~ 27767331 (-)
G94012 NA non-coding upstream 346461 27779037 ~ 27784050 (-)
G94060 NA non-coding upstream 660892 28093468 ~ 28097158 (-)
G94073 NA non-coding upstream 987340 28419916 ~ 28420262 (-)
G94074 NA non-coding upstream 992456 28425032 ~ 28425243 (-)
G93796 NA other downstream 1317405 26109060 ~ 26110074 (-)
G93795 shisa3,LOC102786300 other downstream 1319674 26104026 ~ 26107805 (-)
AMCG00017866 smim19,LOC107754471,LOC106604684,LOC106611785 other downstream 1411537 26012488 ~ 26015942 (-)
AMCG00017861 LOC103354863 other downstream 1469831 25945141 ~ 25957648 (-)
AMCG00017844 frmpd1b,frmpd1,LOC107750435,LOC107570223,LOC107655878 other downstream 2409267 24997544 ~ 25018212 (-)
AMCG00017902 NA other upstream 405675 27838251 ~ 27839790 (-)
AMCG00017906 elavl2 other upstream 666329 28098905 ~ 28144589 (-)
G94172 NA other upstream 1441585 28874161 ~ 28875923 (-)
G94238 pla2g12a,LOC108263807,LOC102792247 other upstream 1836659 29269235 ~ 29273168 (-)
AMCG00017972 dcaf10 other upstream 3153153 30585729 ~ 30596417 (-)

Expression


Co-expression Network