AMCG00017896


Basic Information

Item Value
gene id AMCG00017896
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 27368219 ~ 27395660 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017896
AGCTCAGGATTATGTTACTTGCTGTGTTTTTGACAGTGGTGGTCAATTTTGTTGTGGCAATCAACAGTTTGGTTCCTGGAAAGGCATGCTCGAATGGATACCAATTGGCTGCAGATAATTCAACCTGTGTTGctcCAGAGCCTTTTCTGATCTTCAGCCTTGGCAATGCCATATTCAGCACTGATGGGGATGGATCAAATAACAAGACGATTGTAGCAAAGGCTGGGATTTCAGTCTTGCTGGACTTCCactacagagagagaaggatatACTGGCTGGACTCTGAGACAGGGTTCATACAGAGAGCCTTCATGAATGGCACGAAGAAAGAGCAAGTGTATTCATTGGGGAAAGGCGTATCGGGCTTTGCTGTGGACTGGATACAGAATAATGTAATCTGGACTAATCATCAAAAGGGGAACATTGAAAGAGCTGGGACAGATGGGAAGAATGCAAGGGTGCTTCTACAGAACCTCTCTCAACCCAGTGGCATCATTGTGGATCCAAATGCCAAGTTTATATTTTGGATTTCAGATGGAACGATGGTCCATCAGGCAAATCTCGAAGGGGAAATGACAACCACAGTTTTCAAGACAACTTCCAAACTTCAAACACTTACATTAGATGTTTTTGACAAAAGGCTGTTCTGGGTCCAGTCCAGTTCAGAGGATAAGAGCACTATTGGATCCTGTGACTACAATGGGAATTTTATTCAAACAATGAAGCCATCATTACAATCACAACCACTGTGGATGTCTGTGTTTTTGGAGCACATATACTTCACGGATGGGGAGACTGGAGGCATAAAAAGAGAGAACAAATACACAGGCAAAGACAGTGTGAACATCAGTGGACCACATTTGTTTAATCCGCCAGCTGCTATCAGTGTGGTTCACCCACTCAAACAGCCCAGTGCCGAAGCCTCTGCACTCACAGCAGACCAGCATGACTGCTCTTCTCTGCGGTGTGAAGCCAACGCTAAGTGCTTTCCAGAGCTGGGGGGCGCTGTTTGCCAGTGTTTGGAGGGCTTCTCTGGGGATGGCGAAGTGTGCGTAGacaTCGACGAGTGTAGACTGGGGACCCACAAGTGTGATGCCCATGCAGACTGTGTTAACGCTGAGGGGACGTACGTGTGCAGGTGTATCACTGGGTACACTGGCATGGGATTCGAGTGTGAAGCCGTTTACTGGTGCCGCGCCACTGCTGTGTGCATTGCAGAATCGATTGCCTCTACCTCTGAGCCGGAGACCGCCAGCCCTCCTGTAACGACGACACACTGGCAGAACAACCTCCCGAAGACCTGCCCTCCTGCCTATGAGACGTACTGCCTGTACGGAGGGGTCTGCTTTTACATTCCAGACCTCGAGTCCTACGCCTGCAAGTCAAAGAGATATGCCAGAAGAAGCTCCTCAGTTGATGAAATGAGTGACCTCAGCTGCAGTATCGACAGTGTATCCGgcacaacaaccaccaccacacagCGGCTGTATGTTGTGCTGAAGCGGGGTTCAAACGGGGAAAGCAAAGCTATCCATGTAGTTGGTTGTAAGCCAAGAGCACCTTGTCCTTCCTCCTCATCAGAAACTGGAGACAGTTTTGTGTCGGAGGAAGACGACACTTCACCAAGAGAGAAGCAAAGTGCAGGGTTCCCCTCCGAGTTGTCTGGGGGTCTTCACCAACACACACTGGCCACCAGCGTCACTGACCTCCGCCTGAAGCACAATCCTCACCTGGAGGACGGTCCGGTGGCTGGGAGTGGGCTGACCACGGTGTCGCAGCCGGTCTGAACCCTGGCTCTGTCAGTATTGTACATTACTCCTCACTGAGGACTTGCAAAGAAACGTGAATACATGCCAGTGGAGGACAGTTGTACACAGCAGGTTTAGCTCTATGCATGCATCTCTGCATTACAAATAAGCTACAGAATGAGGGAGGGGAGTcaagggattaaaaaaaatatacaaaaagctatttatttGTCCGCAGTGCTGTCTGTTTGTTGCTGCTCTCCAGGATGTcctcatttctttctttcttcttgacATTTTATGATGAAAAAAACCTCAGACTTccatatagatttattttttcactaaaCATCTGGAAAAACATTGACTTACATGCTTTtggtttgctttgctttgctttgcattttgttgttgttgttgtgtttgtaaagAAAGCATCCTCCAGTTTTCCCTTAGATACACAGGTTTATGACAATTACTACATGGGAAAACATGGAGGTGTACTTATGTTGGTCTACTAAGTAACTGTTTAGTGTATGTAAACTCTAATCTCTATATGTTACAGTTATCATAAACTGTCCTGAAACTGGATTTGAAGTctgtttttatagtttattttttatttttatgttttattgtaattataataatagaaaacccatagtttttgctgttttttgtctACAGAGGAAGGTGCAAAGCTATATAAGATTACTTACACTTATGTGCAGACTACTAAACTACACTATTGACTTAGTTAAATTAATGTCAGTAGACTAATGGAAATTTACTACTAGCATCTTATTTTGGTTTAGATTGTTTTATTCAAAGTTCAATATTTTACCAATAATGTGACTGGAAGAGATAAGCAATGTATGCTTAACTAAGTGACTTGCGTTTTGCTTTAACTAGAGcaatatctttaaaaacaaaaccataagaCAATCCAATCCTTGCTTTACTATATTTGTGATCATACAAAATGAATATCAAGAGCTCTTTTGAATGTACACCAATGAAGTGATTCATAAAGTGTTAGCATATGGGTAGATTGTATTTGGTGAGAGTTCATTGGGCTCTCAGTGAGTTTCTCTGCCACGGTGCGGGAGCGAACAGTGCTGTGATTCAGGCTAGGCATCCATCCCTGGAGTCGAGCACAGTACTCATATTGTAATGCCAGGGGCAGATGAATGCATACAAGCCTCATATGGTATTTAAAACCTTTAATAACATGCTCATTGTTGGGCTTTGCGAGCGAGAGGTCAATAGCTGATTGCTCATTGCAAAAAAGGACTCTTATCTCAGTTTTATACCagtagtaaataaatatttattcaaatattgaTAAGTATGAAATCCTGCAGAGTACTCATTAAATGCCTCATGgcatttaatatgtttaactGCCCCACTATATTGTAGGTTTTACCTTCTTTTTGTGTTAATAAATCCAATGTAGGTTTCCTATTATATAAGCTAAAACCTCACcattctgctgctgctgtaacttaaatatctatttttaatgcaaacgtgtcatttgttttgtcttttcatgAGCTCTTTAATGCTTCAGTTACTCTGAAATGCAGCTTGTTCTATTTCTGCcagtaaataaatcattatataaaaa

Function

GO: NA

KEGG:

id description
K04357 EGF; epidermal growth factor

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017896 True 3381 mRNA 0.43 11 27368219 27395660

Neighbor

gene id symbol gene type direction distance location
AMCG00017891 NA coding downstream 58074 27290553 ~ 27310145 (-)
AMCG00017887 mk1i1 coding downstream 375961 26988294 ~ 26992258 (-)
AMCG00017884 dapp1 coding downstream 382380 26978060 ~ 26985839 (-)
AMCG00017885 NA coding downstream 437626 26922794 ~ 26930593 (-)
AMCG00017880 zgc:110204,LOC107688011,LOC107710476,LOC107589116,LOC107716030 coding downstream 548218 26794801 ~ 26820001 (-)
AMCG00017894 NA coding upstream 4844 27400504 ~ 27408557 (-)
AMCG00017893 NA coding upstream 19914 27415574 ~ 27426232 (-)
AMCG00017895 NA coding upstream 31819 27427479 ~ 27432576 (-)
AMCG00017899 NA coding upstream 303241 27698901 ~ 27723731 (-)
AMCG00017903 NA coding upstream 446552 27842212 ~ 27844771 (-)
G93843 NA non-coding downstream 869042 26498914 ~ 26499177 (-)
G93816 NA non-coding downstream 1014495 26353517 ~ 26353724 (-)
G93802 NA non-coding downstream 1109852 26258096 ~ 26258367 (-)
G93718 NA non-coding downstream 1558366 25809544 ~ 25809853 (-)
G93689 NA non-coding downstream 1850619 25517286 ~ 25517600 (-)
G94008 NA non-coding upstream 367026 27762686 ~ 27767331 (-)
G94012 NA non-coding upstream 383377 27779037 ~ 27784050 (-)
G94060 NA non-coding upstream 697808 28093468 ~ 28097158 (-)
G94073 NA non-coding upstream 1024256 28419916 ~ 28420262 (-)
G94074 NA non-coding upstream 1029372 28425032 ~ 28425243 (-)
G93796 NA other downstream 1258145 26109060 ~ 26110074 (-)
G93795 shisa3,LOC102786300 other downstream 1260414 26104026 ~ 26107805 (-)
AMCG00017866 smim19,LOC107754471,LOC106604684,LOC106611785 other downstream 1352277 26012488 ~ 26015942 (-)
AMCG00017861 LOC103354863 other downstream 1410571 25945141 ~ 25957648 (-)
AMCG00017844 frmpd1b,frmpd1,LOC107750435,LOC107570223,LOC107655878 other downstream 2350007 24997544 ~ 25018212 (-)
AMCG00017902 NA other upstream 442591 27838251 ~ 27839790 (-)
AMCG00017906 elavl2 other upstream 703245 28098905 ~ 28144589 (-)
G94172 NA other upstream 1478501 28874161 ~ 28875923 (-)
G94238 pla2g12a,LOC108263807,LOC102792247 other upstream 1873575 29269235 ~ 29273168 (-)
AMCG00017972 dcaf10 other upstream 3190069 30585729 ~ 30596417 (-)

Expression


Co-expression Network