AMCG00017905


Basic Information

Item Value
gene id AMCG00017905
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 27916426 ~ 27919140 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017905
ATGCAGTACCCCATTGTCATTGCGGTGACCGTGTGGCTCTCGGGATATGTGGACTCGAGGAAAATACGAGGCATTTCCCTGGCATATCGGAGGTTCTACAAGGAGAAGCCGTCCTTTCTGTGCATCGACGGGTCAAAACTCATTCCTTTTACGCAAGTGAACGATGACTACTGTGACTGCCTCGATGGCTCTGATGAGCCAGGTACGGCCGCCTGTTCGAATGGGCGCTTTTACTGCACCAACCTGGGTTTCCGGCCCTACTACATTGCCTCGTCCCGAGTCAACGACGGAGTCTGCGGTAAGGAGATGCATATGCGTGTTGTTGTAACAGAAGGGTAG

Function

GO: NA

KEGG:

id description
K08288 PRKCSH; protein kinase C substrate 80K-H

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017905 True 339 mRNA 0.53 3 27916426 27919140

Neighbor

gene id symbol gene type direction distance location
AMCG00017904 NA coding upstream 6862 27907744 ~ 27909564 (+)
AMCG00017900 LOC107700316,LOC106919300,LOC106948245,LOC105915642 coding upstream 79300 27811222 ~ 27837126 (+)
AMCG00017901 NA coding upstream 129344 27773853 ~ 27787082 (+)
AMCG00017897 NA coding upstream 148098 27744913 ~ 27768328 (+)
AMCG00017892 NA coding upstream 501263 27411360 ~ 27415163 (+)
AMCG00017914 NA coding downstream 754268 28673408 ~ 28692303 (+)
AMCG00017913 NA coding downstream 780903 28700043 ~ 28705029 (+)
AMCG00017915 NA coding downstream 802799 28721939 ~ 28735137 (+)
AMCG00017912 NA coding downstream 849153 28768293 ~ 28787501 (+)
AMCG00017920 papss1 coding downstream 950734 28869874 ~ 28897965 (+)
G94039 NA non-coding upstream 75165 27841053 ~ 27841261 (+)
G93986 NA non-coding upstream 215698 27698724 ~ 27700728 (+)
G93938 NA non-coding upstream 631360 27284722 ~ 27285066 (+)
G93891 NA non-coding upstream 928391 26983969 ~ 26988035 (+)
G93878 NA non-coding upstream 999945 26915913 ~ 26916481 (+)
G94055 elavl2 non-coding downstream 178593 28097733 ~ 28099214 (+)
G94057 elavl2 non-coding downstream 181593 28100733 ~ 28102094 (+)
G94069 NA non-coding downstream 523626 28442766 ~ 28444925 (+)
G94104 NA non-coding downstream 732008 28651148 ~ 28652294 (+)
G94189 NA non-coding downstream 1120870 29040010 ~ 29041944 (+)
AMCG00017898 kcnip4,LOC103360335,LOC100711851,LOC102780455 other upstream 219047 27472881 ~ 27697379 (+)
AMCG00017886 NA other upstream 918974 26992891 ~ 26997452 (+)
AMCG00017843 NA other upstream 2864052 25050309 ~ 25052374 (+)
AMCG00017829 smim14,LOC107700293,LOC107757606 other upstream 3200696 24705270 ~ 24715730 (+)
AMCG00017817 phox2b,LOC101065912,LOC106604546 other upstream 3804316 24108560 ~ 24112110 (+)
AMCG00017910 NA other downstream 712752 28631892 ~ 28646750 (+)
G94275 NA other downstream 1514272 29433412 ~ 29450347 (+)
AMCG00017978 NA other downstream 2900729 30819869 ~ 30831867 (+)
AMCG00018012 NA other downstream 4488289 32407429 ~ 32425235 (+)
G94838 clcn3,LOC106577864 other downstream 4542158 32461298 ~ 32466636 (+)

Expression


Co-expression Network