AMCG00017911


Basic Information

Item Value
gene id AMCG00017911
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 28649941 ~ 28664695 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017911
GACTagcctgcgaagggcgctatacacatacaaattgattgattggtatTACTGATGCTTGCAGACACTACTTCAGATATTGTACGTTTTAGTTGCTGCAACTTCTAGACACCTCGGCTAATTGACTGAGAGCGACCATGCGCTGTAACACGCAATCAATGCTTATTGATCCGTCTCCCCTCACTGCTGTGCTGCTGATGAAATCCTGAGACGTGTCAGCCATTTTCTCTTGGCAAGAGCCGCTGCCTGCCATGTTGTCCGGCCGGGGGAGACTTTCTCCGGCTGCAGTTAGATGGCAGTGTGGGACCGGCGCTCCGGAGGGCAGCCGAGCCGGCGCGGAGAGGGAGAGCGGAAGGAAGGAGGCGTGCACCGGGGCTGCCAGCATGCGTGTCCCGCTGCGCTCCTGCTGCCGGCTCTCGGCGCTGCTGCTGGGCTCGCACCGCGGATCTAAGGCCGGGCTCAGGTGGCACTCGTCCCTGGGAAACATGGTGTCCTACCTCACGGAGGAGCGAGGGCGGCCGCACTGCAAGGACTACAGGATCTACTTCAAAACCGCAGAGGGAAGGTACATCTCTCCCTTCCACGACATCCCCCTTTTTGCTGGAGATGAGCAGgaAAATGATGTCCCATCCAAGAGAGTCAAGAAAAACGAAGATgagATTGCGACTAAAGACCCACTGAACCCTATTAAGCAGGATGTAAAGAAAGGCAAGCTCCGATACGTCGCCAATGTCTTTCCTCACAAAGGTTACATCTGGAACTACGGCGCTCTTCCGCAGACCTGGGAAGCCCCGAGTCTCACGGACAAGGACACGCAGTGCTGCGGGGACAACGACCCGATAGATGTGTGCGATATCGGCTCAAAGGTCCTGGGCATCCTGGCAATGATCGACGCAGGAGAGACGGACTGGAAGATCATCGCCATCAATGTGGAAGACGCAGACGCTcccattttaaacaGTATCGAAGATGTGCGCAAGAACAGGCCGGGCCATTTGGAGGCCACAGTCGATTGGTTCAGGAAGTATAAAGTGCCGGACGGGAGTCCCGAGAACCAGTTTGCCTTTAACGGACAGTTCAAAGACAAGGATTTTGCTCTGGCGATCATTCAGTCCACTCACGAGCACTGGAGGGCACTGGTGCGGAAACAGGTTAATGGAGGAGCGATAAATTGTCAAAACGTGTCGGTATGTGAGAGCCCTTTCAAATGCAGCGAGGATGAGGCTGCAGCCATCGTTAACTCGGCCCCAATCCCCGGGTCACCAGATCCCGTCCCCACTGAAGTGGATAAGTGGCATTTTCTTGCGAAGTGATTCACGAAGAAGGATTGAAACCCTTGAACACAGTCATCTAAAGCCAAAGACTTTCTTCAGAAATGAAACTGTAGAAGCACTTACTACACAAACTGCCACGTTACACCCGTGTAACAGAATAGACTTGTGTTGaacatgtattcaattaaacttTGTGTATGCCTTATTAGTTgacatttgtaaatatacattttttcttgtttttgtcaaGTTGAAATGATACGAAGTTGCAGTTTAAATGTAGAGCTTGCAAGTGTGATCAAGAATAGTTTTTCCAagtattaaataacattaatttagtTCCATTGAGAATCAAGGACTTAAATCTCCAATTGCTCTTGTCATTAAGTACACTTAATTGGGGATAATGGGGAGAAGACAATTAAGTCATAATTTAGTCATTGATTGTTAAAACTGAGTGCAGTCCAATATTCAGGACTGGTTATGTTGCacagaataatataatttgtttcagattgtttttttttgtaaatgatttgtttcttgtgtgtttgttagttgAAGAGGATTGTTTTTTATCCTGAtagttgtttatattttgttctttgaccatatatttgacaaataaaGCGTCTATCATTTTTTA

Function

GO: NA

KEGG:

id description
K01507 ppa; inorganic pyrophosphatase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017911 True 1920 mRNA 0.47 11 28649941 28664695

Neighbor

gene id symbol gene type direction distance location
AMCG00017909 cxxc4,LOC103148507,LOC106610359 coding downstream 80286 28568960 ~ 28569655 (-)
AMCG00017908 NA coding downstream 192003 28457696 ~ 28457938 (-)
AMCG00017907 NA coding downstream 206653 28434032 ~ 28443288 (-)
AMCG00017903 NA coding downstream 805170 27842212 ~ 27844771 (-)
AMCG00017899 NA coding downstream 926210 27698901 ~ 27723731 (-)
AMCG00017916 NA coding upstream 29853 28694548 ~ 28698519 (-)
AMCG00017917 tbck,LOC102796740 coding upstream 150286 28814981 ~ 28841636 (-)
AMCG00017918 NA coding upstream 181683 28846378 ~ 28852152 (-)
AMCG00017924 aimp1,LOC107684278,LOC107675933,LOC107729369 coding upstream 367184 29031879 ~ 29049397 (-)
AMCG00017925 lef1 coding upstream 414314 29079009 ~ 29091940 (-)
G94074 NA non-coding downstream 224698 28425032 ~ 28425243 (-)
G94073 NA non-coding downstream 229679 28419916 ~ 28420262 (-)
G94060 NA non-coding downstream 552783 28093468 ~ 28097158 (-)
G94012 NA non-coding downstream 865891 27779037 ~ 27784050 (-)
G94008 NA non-coding downstream 882610 27762686 ~ 27767331 (-)
G94137 NA non-coding upstream 69129 28733824 ~ 28735744 (-)
G94218 NA non-coding upstream 542775 29207470 ~ 29207804 (-)
G94246 NA non-coding upstream 621512 29286207 ~ 29286747 (-)
G94337 NA non-coding upstream 1247287 29911982 ~ 29914837 (-)
G94358 NA non-coding upstream 1331554 29996249 ~ 29997513 (-)
AMCG00017906 elavl2 other downstream 505352 28098905 ~ 28144589 (-)
AMCG00017902 NA other downstream 810151 27838251 ~ 27839790 (-)
G93796 NA other downstream 2539867 26109060 ~ 26110074 (-)
G93795 shisa3,LOC102786300 other downstream 2542136 26104026 ~ 26107805 (-)
AMCG00017866 smim19,LOC107754471,LOC106604684,LOC106611785 other downstream 2633999 26012488 ~ 26015942 (-)
G94172 NA other upstream 209466 28874161 ~ 28875923 (-)
G94238 pla2g12a,LOC108263807,LOC102792247 other upstream 604540 29269235 ~ 29273168 (-)
AMCG00017972 dcaf10 other upstream 1921034 30585729 ~ 30596417 (-)
G94543 NA other upstream 1963293 30627988 ~ 30658493 (-)
AMCG00018000 slc1a1 other upstream 3595012 32259707 ~ 32263865 (-)

Expression


Co-expression Network