Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00017922 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030131.1 |
| NCBI id | CM030131.1 |
| chromosome length | 33043351 |
| location | 29026015 ~ 29029373 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0030145 | manganese ion binding | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00017922 | True | 1235 | mRNA | 0.52 | 2 | 29026015 | 29029373 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00017919 | NA | coding | upstream | 59137 | 28955480 ~ 28966878 (+) |
| AMCG00017920 | papss1 | coding | upstream | 128050 | 28869874 ~ 28897965 (+) |
| AMCG00017912 | NA | coding | upstream | 238514 | 28768293 ~ 28787501 (+) |
| AMCG00017915 | NA | coding | upstream | 290878 | 28721939 ~ 28735137 (+) |
| AMCG00017913 | NA | coding | upstream | 320986 | 28700043 ~ 28705029 (+) |
| AMCG00017923 | NA | coding | downstream | 21781 | 29051154 ~ 29055527 (+) |
| AMCG00017921 | hadh,LOC107594428 | coding | downstream | 27243 | 29056616 ~ 29060724 (+) |
| AMCG00017927 | NA | coding | downstream | 221014 | 29250387 ~ 29257707 (+) |
| AMCG00017931 | NA | coding | downstream | 312822 | 29342195 ~ 29353887 (+) |
| AMCG00017936 | NA | coding | downstream | 339398 | 29368771 ~ 29416813 (+) |
| G94104 | NA | non-coding | upstream | 373721 | 28651148 ~ 28652294 (+) |
| G94069 | NA | non-coding | upstream | 581090 | 28442766 ~ 28444925 (+) |
| G94057 | elavl2 | non-coding | upstream | 923921 | 28100733 ~ 28102094 (+) |
| G94055 | elavl2 | non-coding | upstream | 926801 | 28097733 ~ 28099214 (+) |
| G94039 | NA | non-coding | upstream | 1184754 | 27841053 ~ 27841261 (+) |
| G94189 | NA | non-coding | downstream | 10637 | 29040010 ~ 29041944 (+) |
| G94236 | NA | non-coding | downstream | 244374 | 29273747 ~ 29274011 (+) |
| G94245 | NA | non-coding | downstream | 256820 | 29286193 ~ 29286745 (+) |
| G94255 | NA | non-coding | downstream | 277727 | 29307100 ~ 29310853 (+) |
| G94260 | NA | non-coding | downstream | 293199 | 29322572 ~ 29323345 (+) |
| AMCG00017910 | NA | other | upstream | 379265 | 28631892 ~ 28646750 (+) |
| AMCG00017898 | kcnip4,LOC103360335,LOC100711851,LOC102780455 | other | upstream | 1328636 | 27472881 ~ 27697379 (+) |
| AMCG00017886 | NA | other | upstream | 2028563 | 26992891 ~ 26997452 (+) |
| AMCG00017843 | NA | other | upstream | 3973641 | 25050309 ~ 25052374 (+) |
| AMCG00017829 | smim14,LOC107700293,LOC107757606 | other | upstream | 4310285 | 24705270 ~ 24715730 (+) |
| G94275 | NA | other | downstream | 404039 | 29433412 ~ 29450347 (+) |
| AMCG00017978 | NA | other | downstream | 1790496 | 30819869 ~ 30831867 (+) |
| AMCG00018012 | NA | other | downstream | 3378056 | 32407429 ~ 32425235 (+) |
| G94838 | clcn3,LOC106577864 | other | downstream | 3431925 | 32461298 ~ 32466636 (+) |
| G94857 | LOC106577504,LOC103385245,LOC108267515 | other | downstream | 3478317 | 32507690 ~ 32601449 (+) |
