AMCG00017935


Basic Information

Item Value
gene id AMCG00017935
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 29288829 ~ 29304804 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017935
gggggaggaagaggaaggaggaagaTGGAAGGGAATAAAGACGAAGCGGAGAAATGCCTCCTAATAGCGAGGAAAGCCCTGGACGCCGGGGACAAGGAGGCCGCCATGAAGTTCCTGAGGAAAGCGCAGAGACTCTACCCCACCGACAAAGCCCGAGTGCTGCTGGACGGATTGACCCAGAACGGGAGCTCGGCGGGGAACGGGGCGTACCGCAGGAAGCCGGCGGACGGAAGCGATGGGAGCGTGCCCCGGCCCGAGAAGGACGGCCAGGGGATGACTGCAGGTCCCGGAGATACGGCCAAAAGCTTCACTAAAGACCAGGTGGAGGGCGTGCAGAGGATAAAGAAATGCAAGGATTACTACGAGGTGCTGGGCGTCACGAAGGAGGCCAACGAGGAAGAGCTGAAGAAGGCCTACAGGAAGCTGGCTCTGAAGTTCCACCCCGATAAGAACCAGGCTCCTGGGGCCACGGACGCCTTTAAAAAGATCGGCAACGCGTATGCCGTGCTCAGCAACCCGGAGAAGAGGAGGCAGTACGACCTGACAGGCGGGGAGGACCCAGCGGCCGCCGCCCAGCAGGGCCGCTCCGGCTTCGACTTCCACCGGGGCTTCGAGGCAGACATCACTCCAGAGGACCTCTTCAACATGTTCTTCGGGGGAGGCTTCCCTTCCAGTGAGAACCCCCGCTGCCCCTCGTTGAGCCCCCTTTACAAGCAGTTCGTCAGCAGCTCCCCTCTTGAGTCCCTGCACCGATTAAACGATGAAAGCTGCTCGTTAAGACTGAGGCTTAAGGCTTTGTTGGGGGAAATTTCACTCAGGATTTTGGGCAGCGCGCACACCTTCCCTAACGGCCGGGCGCGGTACAGCCCTCAGTACCAGAACCagacacggagagagagggaggaggagaggggcgATGGGGGGTTTTCCATGTTCATTCAGCTGATGCCCATCGTGGTTCTGATCTTGGTGTCCATCCTGAGCCAGCTGATGGTGTCCACTCCTCCATACAGCCTCTACCCCAGGCCGGCCACGGGCCAGACGATCAAACGGCACACCGAGAACCTGCACATCGACTACTACGTGTCCAGGGACTTCAAGTCGGAGTACCGGGGCTCGGCGCTGCAGAAGATCGAGAAGGGCGTGGAAGAGGACTACGTCTCCAACGTCAGGAACAACTGCTGGAAGGAGAGGCAGACGACTTCGCAGAGGAGGAGAAAGTCCAGCCCTGGCCTCGCTGCCCGTCTGGACCGACACCGAACAGAGCAGAAGGTAGAGAAGATAGTTATGGACGAG

Function

GO: NA

KEGG:

id description
K09520 DNAJB14; DnaJ homolog subfamily B member 14

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017935 True 1296 mRNA 0.60 8 29288829 29304804

Neighbor

gene id symbol gene type direction distance location
AMCG00017933 NA coding downstream 4998 29274894 ~ 29283831 (-)
AMCG00017930 NA coding downstream 15545 29273051 ~ 29273284 (-)
AMCG00017929 LOC104953273 coding downstream 15897 29269281 ~ 29272932 (-)
AMCG00017928 LOC100135902,LOC106610344 coding downstream 25296 29258505 ~ 29263533 (-)
AMCG00017926 lef1,LOC103361279 coding downstream 171187 29100508 ~ 29117642 (-)
AMCG00017932 ttc39b,LOC106578215 coding upstream 2279 29307083 ~ 29332479 (-)
AMCG00017934 psip1 coding upstream 50235 29355039 ~ 29365548 (-)
AMCG00017938 NA coding upstream 220631 29525435 ~ 29527497 (-)
AMCG00017937 bnc2,LOC107737408,LOC107737409,LOC107678088 coding upstream 233351 29538155 ~ 29544905 (-)
AMCG00017939 bnc2,LOC106933596 coding upstream 272305 29577109 ~ 29584432 (-)
G94246 NA non-coding downstream 2082 29286207 ~ 29286747 (-)
G94218 NA non-coding downstream 81025 29207470 ~ 29207804 (-)
G94137 NA non-coding downstream 553085 28733824 ~ 28735744 (-)
G94074 NA non-coding downstream 863586 28425032 ~ 28425243 (-)
G94073 NA non-coding downstream 868567 28419916 ~ 28420262 (-)
G94337 NA non-coding upstream 607178 29911982 ~ 29914837 (-)
G94358 NA non-coding upstream 691445 29996249 ~ 29997513 (-)
G94359 NA non-coding upstream 693550 29998354 ~ 30002282 (-)
G94392 NA non-coding upstream 804167 30108971 ~ 30109182 (-)
G94483 NA non-coding upstream 1151394 30456198 ~ 30461173 (-)
G94238 pla2g12a,LOC108263807,LOC102792247 other downstream 15661 29269235 ~ 29273168 (-)
G94172 NA other downstream 412906 28874161 ~ 28875923 (-)
AMCG00017906 elavl2 other downstream 1144240 28098905 ~ 28144589 (-)
AMCG00017902 NA other downstream 1449039 27838251 ~ 27839790 (-)
G93796 NA other downstream 3178755 26109060 ~ 26110074 (-)
AMCG00017972 dcaf10 other upstream 1280925 30585729 ~ 30596417 (-)
G94543 NA other upstream 1323184 30627988 ~ 30658493 (-)
AMCG00018000 slc1a1 other upstream 2954903 32259707 ~ 32263865 (-)
AMCG00018004 NA other upstream 2966890 32271694 ~ 32276372 (-)
AMCG00018007 NA other upstream 2980681 32285485 ~ 32308080 (-)

Expression


Co-expression Network