AMCG00017936


Basic Information

Item Value
gene id AMCG00017936
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 29368771 ~ 29416813 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017936
GGGGCGCCGGCCAATCGGAGACGCGGAAGAGCGACGGAAGTGACCGTTGTAACTCCCAGCGGCGCAACATGGCGTCAGATTTAAACGGCCTGTGCGGAGCTGTCACTCGGAGCGGAGTCCGCGCCATGACTGAGCTTGGGACATCTGCGCTGAGAATGAGAGAGACCGAGAGGAGCCCGGCCAAGCCCAGGGAGGCCGGCCAGTCTAAACAAGGCAGCAGGACGCCACGGAAGAACAGCACGAAACAGAGCGGCGCCAGGGGCTCGGCGGACGAGATCGCACGGCTGAAAGAGGTAATCGTTCGGCTGCAGAGTGAACGCGAGAAGAATGAGGGAAGCGACTGCATTTCAGACCTGAGGTGGAAACTCAACCAGTCGGAGAAGGAAAAGCTGCAACTCGCTACCAAGTACAACGAGGAGGTGTCCCAGTATGAGAGTCACGTGGCCAAGCTGCGGGCCCAGCTAGAGCGAGGGGAGGCCCAGCGGCAGAACCTGGAGTACGAGATCGCGGTGGCGCGCAAGGATGCCAGTCTGGAGAGGAGCAGCGCCGAGGACAGGGTGGCTAGCGTCCGGGAAAAGAACGAGCACCTGAGAGTCCAAAACGCCGAGCTCCAGCAGCGTGCGTCCGACCTAGAGAAGGCGCTGCAGATCACCCAGCAGGCGCGGGACGAGGACCAGAACGCCGAGCTGCTGGCCGCCGAGAAGAGCCGCCTGGAGGCCGAACAGGAGGACACCCTGCTGGAGCTGCACGGGAGGCTGAGCCAGGCGCAGAGGGAGCGGGACCGGGACGCCGAGGCCCTGAGGAGACGGGCCAACGAGCTGGAGCACAGCGCCGACCGAGAGGAGCGGCTCATGAGGGAGCTGGAGACAGCCACACAGAGAGTCAAGAGTCTGGAGGAGAGTGTGGAGTCGGAGCGGGCCGCCCACTTAGAGTCCAAATTCAACTCGGAGATCGTGCAGCTGCGGATCCGGGACCTGGAGGCGGCGCTGCAGGTGGAGAAGGCGGGCCAGGCCGAGGCGCTGTCCAGCCTGGAGCTCGTGAGGACGCAGTTCAGGGAGGTGGAGAAGGCCTACGAGCGGGAGAAGGACAGAGCCGCGGAGGCGCTGGACAGACTGCGGCAGCTTGAAAAGGAGCAGCTGTCCACGCAGTCTCGGCTGGGGGAGGAAGTGGAGGAGAAGGGAAGGGAGCTCGCAGCGCTCTCTGCGGCGCGTCGGGCCCGGGCCCGGCAGCCAGGAGAGCAAGGCAAGCTGAGCCCCTCTGTCCTCTTGGAGAGTCTCCGCCGGACGTTGGTGTTTTACCAGGAGAAGCTGCGCCAGACGGTCAATGACGAAGCGCGGGCAAGTCTGGCGGCCGCCACCACCGAGATCAACCTCCTGCGCTCCGCCTGCGCAGACGGAGACTCCCGGGCCGCGCGCGCGCAGACGGAGCTGCAGAGCGCTCGGCGCCGCTGGGAGGCTGAGAGAGCGCGGGCCGCGGAGGCTGAACGCGAAATCCACAAGCTTACCCAGGTTTACCAGCAGGATTCTCAGGAGAAGCTGACCTTTCTCCACGACCTGTACCAGCGCCTGGTAGCAGGCTGTGTGCTAATAAAACAACCCGGGGGCCTGCTGGGCCGCTTCTCCTGGCCCGAGCTGCGCGCCGTCCTGCAGGAGCAGACTGATGCCGTGACCTCCGACCTCAGCCGGGCTAATGAGAAGATCTCCCATCTAGAGTTCGTCTGTCAGAGCAAGAGCGCGGCGGTGGCGGAGCTGCAGCAAACGCAGGAGCACACCTTCAGCAAGCTGGCGGAGCAGCTCCGAGAGAGGGAGGCGGCCTGGCAGAAGCAGAGGAGAGACCTGGAGCAGCACTACTCGAGTCTGACCGGGGAAGTCCAAGCCCGGGCGCAGAAGTGGCACCGGGCGGCGGAGGAAGCCCAGGAGAAGGCATCTGGTCTGGAGCAGATCCGGGACCAGATGGCGCTGGATCTCGCCCGCTCCCAGAAGCTCCTTTCCGGGGCCCGGCGCGAGGGGGAGGCCCTGCTGGCGGCCTGCGCCCTGCTGGCCGGTGCCCTGTGCCCCCTCTCCCGTCAGCTGCGCTCCCTGTCCCGCCAGAAGACCCGGCTGCTGGAGCAGGTTGGCGCCGGCGAGATGTTCAGACGCCAGATCCAGACCCTGCTGCTGGCCTTGACTGCGGAGAGCGAGACCCACGAGCCGCCTCTGGTCCAGGGGAGGCCGGCCGGGCGCATGGCGGGCATGTTCCGGAGTGCTGCCATCACCGTGATCGCGCTGCACCGCTTCCGCAGGTTGGGTCGGGACTGCCCACGGCTCTTCACCTGGACGCGGGGCTTTGGCGACCTCCCGGCTCTCGCGGTCTGCGCCGGAGGGGTAACGTCGGCTGCGCAGTGGCCCGCGGAGGGGAAGCAGGCGTGGCGCAGCGGTCAGGCCAGGCGGTGGCTCACCAGCCGGGATTTACTCACCGCGGTCCTCAGCTCAATGGCTGAGCTACTGGACACCATGTCTAAAACAGATGCCAGCTCTCCGTCCACCGTGCTGCTCAGCGCTGCCCAGAGCTCCTTCGCCAAGCTGATGCAGCGGCTGGATGTGGAGATGGAGGGAGGCGGGCTGGACTGGCAGGGAGAGCAGGGCGGGCTGAGCAGCAGGCTGGGCCAGGGCCTCCACAGCTTCCGCGAGAAGATGCTCAAAGCCGGAGTGCCTACAGCCATGACAAACGAGGACTTGGCCGCCTCCCTGAAGCAGCACATGCTGGAGTTCATGCGCCGGCTTCACGCGGCCGAGGTGGAGCGGCGGGGGCTGCGCGTGGAGCTGGGCCAGCTGAAGCGTGCCCTGAAGGAGCTGAAGAAGGAGGCCGAGCGGGCGCAGGGCGTGAAGGTGGCAGCGCAAGCTagagagcagcaggCCCAGACTCTGCTGCAGGACCAGGCCCGGCAGCTGCACGACCTGGGCCTGCGCCTGGAGCTGCACTCGGGGGAGGAGGCGGAGAAGGACCGGACCCTGTCCCAGGCGGTCCAGAGTCTCTCGGAGGCGAAGACGGAGCTGAGGAGGAAAGATCAATCCCTGCGTCAACTCGGCAAGCACCTCTCCCAGCTGGAGCAGGACAAGCGTCAGCTGCAGCAGAGCATCCGTGATGCGGAGAGCGCCCTCCGCATGGCAGCCAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017936 True 3155 mRNA 0.66 21 29368771 29416813

Neighbor

gene id symbol gene type direction distance location
AMCG00017931 NA coding upstream 14884 29342195 ~ 29353887 (+)
AMCG00017927 NA coding upstream 111064 29250387 ~ 29257707 (+)
AMCG00017921 hadh,LOC107594428 coding upstream 308047 29056616 ~ 29060724 (+)
AMCG00017923 NA coding upstream 313244 29051154 ~ 29055527 (+)
AMCG00017922 NA coding upstream 339398 29026015 ~ 29029373 (+)
AMCG00017940 LOC106610258,LOC102204558 coding downstream 324121 29740934 ~ 29756915 (+)
AMCG00017941 NA coding downstream 340741 29757554 ~ 29764700 (+)
AMCG00017942 NA coding downstream 389827 29806640 ~ 29833363 (+)
AMCG00017943 LOC108276379,LOC100698524,LOC102195089,LOC102797997 coding downstream 486002 29902815 ~ 29912178 (+)
AMCG00017946 NA coding downstream 536654 29953467 ~ 29954534 (+)
G94260 NA non-coding upstream 45426 29322572 ~ 29323345 (+)
G94255 NA non-coding upstream 57918 29307100 ~ 29310853 (+)
G94245 NA non-coding upstream 82026 29286193 ~ 29286745 (+)
G94236 NA non-coding upstream 94760 29273747 ~ 29274011 (+)
G94189 NA non-coding upstream 326827 29040010 ~ 29041944 (+)
G94308 bnc2,LOC106936717,LOC106933596,LOC107595060 non-coding downstream 160343 29577156 ~ 29577403 (+)
G94310 NA non-coding downstream 233977 29650790 ~ 29651074 (+)
G94348 NA non-coding downstream 561340 29978153 ~ 29980642 (+)
G94505 NA non-coding downstream 1122155 30538968 ~ 30544554 (+)
G94522 dcaf10,LOC102795877 non-coding downstream 1168897 30585710 ~ 30591176 (+)
AMCG00017910 NA other upstream 722021 28631892 ~ 28646750 (+)
AMCG00017898 kcnip4,LOC103360335,LOC100711851,LOC102780455 other upstream 1671392 27472881 ~ 27697379 (+)
AMCG00017886 NA other upstream 2371319 26992891 ~ 26997452 (+)
AMCG00017843 NA other upstream 4316397 25050309 ~ 25052374 (+)
AMCG00017829 smim14,LOC107700293,LOC107757606 other upstream 4653041 24705270 ~ 24715730 (+)
G94275 NA other downstream 16599 29433412 ~ 29450347 (+)
AMCG00017978 NA other downstream 1403056 30819869 ~ 30831867 (+)
AMCG00018012 NA other downstream 2990616 32407429 ~ 32425235 (+)
G94838 clcn3,LOC106577864 other downstream 3044485 32461298 ~ 32466636 (+)
G94857 LOC106577504,LOC103385245,LOC108267515 other downstream 3090877 32507690 ~ 32601449 (+)

Expression


Co-expression Network