AMCG00017941


Basic Information

Item Value
gene id AMCG00017941
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 29757554 ~ 29764700 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017941
ATGCCAGAGGACGGCCGAAGGTTCCAACAGCAAGACGAGGACGACAGCCCGTCCGTTGTGCTCCGCGATCTCGTGTTGGAGGATGACATTAAGGCCGCCAGGCAGCAGGTTGAAGAGATGCACAACAAATGCAACGACCTGGCCGCTCAGCTGGGGTCCAGGGAGGCCGAGCTGGGCCACAGAGAGGCTGATGTGACCAAACTAAGGCAAAGCACGGAGCACGCGGCGCAGCAGGCCGAGCTCATCCAGCAGCTGGAGACCCTCCACCTGGACGCCCAGAAGGTCCTGCGCAACCAGGAGGACGCCCACACCCACGAGACCATCTCCTATCAGAAGCTGTACAATGAGCTGAGCATGTGCTACGAAGCCCTGAAGTCCAGTGAGACCCAGCTGCGTCAGAGCCACGTCTCGCTGACGACACAGCTGCACCAGAAGGAGCAGCAGATCAGCCAACTCCAGGCCAGGCTGCTGCAGACTCTCCCCACCTCCTGTCAGCAGCAACGGCAAGCAAACGCCACACAGCTGGAGATCCCCCATAGCTGCAGTCCGGGCCGGCACGCCGTTGTTTGCCCAGGCTCTGTGATGGACGCGGAGGCCGGGCCCGACCTTCCCAGCGTGAGGAGGCAGATCTCATATTTTGGGGGCCTGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017941 True 651 mRNA 0.62 5 29757554 29764700

Neighbor

gene id symbol gene type direction distance location
AMCG00017940 LOC106610258,LOC102204558 coding upstream 639 29740934 ~ 29756915 (+)
AMCG00017936 NA coding upstream 340741 29368771 ~ 29416813 (+)
AMCG00017931 NA coding upstream 403667 29342195 ~ 29353887 (+)
AMCG00017927 NA coding upstream 499847 29250387 ~ 29257707 (+)
AMCG00017921 hadh,LOC107594428 coding upstream 696830 29056616 ~ 29060724 (+)
AMCG00017942 NA coding downstream 41940 29806640 ~ 29833363 (+)
AMCG00017943 LOC108276379,LOC100698524,LOC102195089,LOC102797997 coding downstream 138115 29902815 ~ 29912178 (+)
AMCG00017946 NA coding downstream 188767 29953467 ~ 29954534 (+)
AMCG00017948 anp32b coding downstream 225946 29990646 ~ 30002319 (+)
AMCG00017953 NA coding downstream 301977 30066677 ~ 30089697 (+)
G94310 NA non-coding upstream 106480 29650790 ~ 29651074 (+)
G94308 bnc2,LOC106936717,LOC106933596,LOC107595060 non-coding upstream 180151 29577156 ~ 29577403 (+)
G94260 NA non-coding upstream 434209 29322572 ~ 29323345 (+)
G94255 NA non-coding upstream 446701 29307100 ~ 29310853 (+)
G94245 NA non-coding upstream 470809 29286193 ~ 29286745 (+)
G94348 NA non-coding downstream 213453 29978153 ~ 29980642 (+)
G94505 NA non-coding downstream 774268 30538968 ~ 30544554 (+)
G94522 dcaf10,LOC102795877 non-coding downstream 821010 30585710 ~ 30591176 (+)
G94555 NA non-coding downstream 953478 30718178 ~ 30722318 (+)
G94583 NA non-coding downstream 1559824 31324524 ~ 31340832 (+)
G94275 NA other upstream 307207 29433412 ~ 29450347 (+)
AMCG00017910 NA other upstream 1110804 28631892 ~ 28646750 (+)
AMCG00017898 kcnip4,LOC103360335,LOC100711851,LOC102780455 other upstream 2060175 27472881 ~ 27697379 (+)
AMCG00017886 NA other upstream 2760102 26992891 ~ 26997452 (+)
AMCG00017843 NA other upstream 4705180 25050309 ~ 25052374 (+)
AMCG00017978 NA other downstream 1055169 30819869 ~ 30831867 (+)
AMCG00018012 NA other downstream 2642729 32407429 ~ 32425235 (+)
G94838 clcn3,LOC106577864 other downstream 2696598 32461298 ~ 32466636 (+)
G94857 LOC106577504,LOC103385245,LOC108267515 other downstream 2742990 32507690 ~ 32601449 (+)
AMCG00018027 NA other downstream 3024741 32789441 ~ 32793604 (+)

Expression


Co-expression Network