Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00017954 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030131.1 |
| NCBI id | CM030131.1 |
| chromosome length | 33043351 |
| location | 30121865 ~ 30129314 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00017954 | True | 1164 | mRNA | 0.55 | 5 | 30121865 | 30129314 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00017955 | NA | coding | downstream | 8901 | 30112290 ~ 30112964 (-) |
| AMCG00017949 | NA | coding | downstream | 91341 | 30011310 ~ 30030524 (-) |
| AMCG00017945 | NA | coding | downstream | 138609 | 29976744 ~ 29983256 (-) |
| AMCG00017944 | trmo | coding | downstream | 146060 | 29971090 ~ 29975805 (-) |
| AMCG00017947 | NA | coding | downstream | 155239 | 29965499 ~ 29966626 (-) |
| AMCG00017963 | cisd2,LOC106602754 | coding | upstream | 302889 | 30432203 ~ 30439609 (-) |
| AMCG00017967 | NA | coding | upstream | 360162 | 30489476 ~ 30490828 (-) |
| AMCG00017966 | nfkb1 | coding | upstream | 361912 | 30491226 ~ 30514195 (-) |
| AMCG00017965 | LOC107749781 | coding | upstream | 409654 | 30538968 ~ 30580996 (-) |
| AMCG00017971 | NA | coding | upstream | 476199 | 30605513 ~ 30607128 (-) |
| G94392 | NA | non-coding | downstream | 12683 | 30108971 ~ 30109182 (-) |
| G94359 | NA | non-coding | downstream | 119583 | 29998354 ~ 30002282 (-) |
| G94358 | NA | non-coding | downstream | 124352 | 29996249 ~ 29997513 (-) |
| G94337 | NA | non-coding | downstream | 207028 | 29911982 ~ 29914837 (-) |
| G94246 | NA | non-coding | downstream | 835118 | 29286207 ~ 29286747 (-) |
| G94483 | NA | non-coding | upstream | 326884 | 30456198 ~ 30461173 (-) |
| G94482 | NA | non-coding | upstream | 330235 | 30459549 ~ 30460888 (-) |
| G94533 | NA | non-coding | upstream | 481507 | 30610821 ~ 30614319 (-) |
| G94563 | NA | non-coding | upstream | 589038 | 30718352 ~ 30721502 (-) |
| G94577 | NA | non-coding | upstream | 850581 | 30979895 ~ 30980552 (-) |
| G94238 | pla2g12a,LOC108263807,LOC102792247 | other | downstream | 848697 | 29269235 ~ 29273168 (-) |
| G94172 | NA | other | downstream | 1245942 | 28874161 ~ 28875923 (-) |
| AMCG00017906 | elavl2 | other | downstream | 1977276 | 28098905 ~ 28144589 (-) |
| AMCG00017902 | NA | other | downstream | 2282075 | 27838251 ~ 27839790 (-) |
| G93796 | NA | other | downstream | 4011791 | 26109060 ~ 26110074 (-) |
| AMCG00017972 | dcaf10 | other | upstream | 456415 | 30585729 ~ 30596417 (-) |
| G94543 | NA | other | upstream | 498674 | 30627988 ~ 30658493 (-) |
| AMCG00018000 | slc1a1 | other | upstream | 2130393 | 32259707 ~ 32263865 (-) |
| AMCG00018004 | NA | other | upstream | 2142380 | 32271694 ~ 32276372 (-) |
| AMCG00018007 | NA | other | upstream | 2156171 | 32285485 ~ 32308080 (-) |
