AMCG00017965 (LOC107749781)


Basic Information

Item Value
gene id AMCG00017965
gene name LOC107749781
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 30538968 ~ 30580996 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017965
atgGCAGACGGCGGTCGAGGGAAGCCCGGCAGCTGCGGCGCCGACAGCCCGAGCGGCAGCCCCGTCCCCGGGCGGAGGAAAGCGCAGCCCTCGCCGGGCTCCCGGGCCAAGCAGCAGCTGGAGGCTGCCGGCCACAGCTTCAAGAAAGTGACCCTGACCAAGCCCACCTTCTGCCACCACTGCGGGGACTTCATCTGGGGGCTGGCCGGCTTCCCCTGTGAAGTGTGCAACTTCATGTCCCACGAGAAATGTCTGAAACACGTGAAGACTGTGTGCTCCTGCATGTTCCCCACGCTGGTGCGGGTCCCAGTTGCCCACTGCTTTGGGCCCCCCAGCCACAAGAAGAAGTTCTGTGCCATCTGCAGGAAGTCTCTTGAGGGAAGCTCCACCCAGCGTTGTGAAGTGTGCGAACTCCATCTCCACATAGACTGCGCTCCCTTCAGCTGCAGCGACTGTCGCCTCTGCCATCAGGACGGCCTGCAGGATCACGATGTCTACCACCACCACTGGAGGGAGGGCAACCTGTCCTCGGGGGCCCGCTGCGAGGTGTGTCGGCGGACATGCGGCTCCTCCGAGGTGCTGGCGGGGGTGAGGTGTGAGTGGTGCGGGATCACGGCACATGCTTCCTGTTATGTAATCATACCTCCCGAATGTAACTTTGGACGACTGAAGAACATGATCCTCCACCCGACCTGCGTGCGGATCTCATCCCGAAACTTCAGCAAAATGCACTATAATAGTGATGATGTTGATGCCCCTAATGCAGGAACTACAAAAGAAACACCCACACCTTCGCCGGATTCAAGCAAACAGATGCTCAAGGTATTTGATGGCGATGATGCAGTGAAGCGCAATCAGTTTCGGATCGTTTCCATTCCCCGGATAACGAAGAATGAAGAAGTGGTGAGCATGTCCCTGCAGGAGGCGGCGTTGCGGGCGCTCTACCTCCCAGAGGAGTCCCAGGGCTATGAGCTGCAGGTTTACGGGCAGCAGGGCCTGGTGAGTGAGGACATCATCAATCGCAATGGGGCCACCGACAACAAGGCCCTGTCCGCCTTCAAGGACGGCGTGCCGGAGGCCTGGATCCTGAGAGCCAAGCCGAGGGACACCGAGGTGCTCAAGATCTACGCAGGCTGGCTGAAACTCGGAGTCGCCTACATCTCTATCTCCATTGGAAAGAAAAGCACCGTGGATTCGGTCATCAGAGAGGTTCTTCAGCAGCTCGGCAAACAGGATGAAGACCCTGAAGGCTTCAATCTGGTGGAGGTGTTTATGGGCAGTAAGCAAGTTCAACGGCAAGTGCTGACCAGTCAGGAACTCCTGCTCGATAAACTCCAGGATATTAGAAAGACCTCCCTGAGACAGATGAACCAGACGCGCTTCTACATCGTGGAGAAGAGGAACTCCGTGGTGCGGGTCTCCCTAATGCTGGGGGGTCTGCCGGCGCAGCTGAGCAAAGAGGAGTATGCGGACCTGCTGCAGGAGCACCTCAACACCAAGAGTCATCTGGTTTCTATCTCGCATGTGTACGCAGGACAAGGAGCTGTGGTTCTGGACATATCCTGCTTTTCTGAAGCGGAAAGGATATACATGCTGGCCAAGGATACTACAATCAGTGGCAAACAACTATATTCATTAGTAATTCCTGAAATCACGCACAAGAAACTGCCTCGAGATTCCTGCCCTCTGCTTGTGTTTGTCAATCCAAAAAGTGGAGGGCTTAAGGGACGGGACCTCCAGTACAATTTCCGCAAACTGCTCAACCCCCATCAAGTCTTTGAACTGACAAGTGGGGGCCCTTTGCCCGGgcTGCACACATTTCGGGAAGTGCCATTTTTCCGGATCCTGGTGTGCGGGGGGGACGGCACAGTGGGCTGGGTACTGGGGGTGCTGGAGGAGGTTCGGCACAAGCTGGCTTGCTCTGAGCCGGCCATTGGCATCATCCCGCTGGGCACAGGCAATGACCTTTCCCGTGTGCTGCGCTGGGGGACGGGGTACAGCGGGGAGGACCCCTACCACATCCTACTGTCCGTGGACGAGGCAGAGGAGACCCAAATGGACCGCTGGACCATCCTGCTGGACGCTCAGGAGATGGCCGAGGACGGGAAGGAGAACGGCATCCTCGAGCCCCCGAAGTCCCAGAGGTTTCACAATAAAGGCGTGTACGTGAAGGTGGGCTTGCAGAAGCTCAGCCACACCAGGAATCTGCACAAGGACCTCAAACTGCAGGTGGACAAGCAGGAGGTGGAGCTGCCCAGCATAGAGGGCCTCATCTTCCTCAACATCCCCAGCTGGGGCTCGGGAGCCGACCTGTGGGGCTCGGACAGCGACGCGCGCTTCGGGAAGCCCCGCATCGATGACGGCATGCTGGAGGTGGTGGGTGTCACTGGCGTGGTCCACATGGGTCAGGTGCAGAGCGGTCTGCGCTCCGGGATCCGGATCGCTCAGGGGAACTACATCCGGATCACCGTGATGAAGCCCATTCCTGTGCAGGTGGACGGTGAGCCGTGGATCCAGGCTCCGGGACAGATCATCATCTCCGCAGCTGGGCCCAAGGTCCACATGCTGAGGAAATCTAAAACCAAGCAGAAGAAACATTCGGGGAGTTTGAAAGAGACGAGAACAGACAGCTTGTCAGCCAGCGAGGGGGGGCACTGAGATTAACAAGAGGCCCCACTGCTGGGAGGACAGTAGACCAGCCTGCCAGCTGTGAATCACACGGCACTCACAAACATGGCACACGTAAGCTTGAACAGTTGGAGGATCCCGCATCTCTGTCCTCCTTCAACCGCTCATTCTACTACTCCTGAATGTAGTCGTTCTAGAACATCGCCACTAAGGGTTCcatttgcagtgtttttgttcttgttgatCGTTTTACTTTGGGGGTTTTTCCCATTGTGCTATGATCATCAATTTGGTGACAGTGTCTGTTTATTAATGAAACCTTCATATTCGACATGTTTTTAGCTTGTAATATACTTGAAGTTGACCTCCCACAAGCAACTGAAACCTCATAGTCTTGTCATTGGATTGCAGTGCTCCTGTGTGCTTTCATGTTGACTTAGATGTAACTCGTTCCTAGGTTGATTTCTTCGGTATTAGAGTGGCTTAGGAAAATCTGTCCGACTCATGTGCGTTACTTGATCCTTGGTCAGTCAGGACTGGGGCCGTCCCAGACTAGCTTCTCACAGCACTAAAGCAGAGTCTTTGAGAACGTCAGTCTTGTCACACAGCCACTTGCATCTGTACAGACAACACTGTAGTGCTGAGGGATCTCAGATACATCTGCATCACTGTTTGAGAACTGGGTTCAGCCCAAGGATGTGCTGGAATTTTCTGTTATTCTCTGAATGCTTTACTCATAGCAAAAAGTGATCGGTCATCTCAAAAGCTCTCCATTTAAGGGAAACCAGTTACtagtaatgaaaatgtaatctccctaattaaaaaaatacatacaaatctttGCTGGTGTGGTTTGCTAGTAATCTAGTGGCGATAGATTTACACTGACTACTAGCAAATCCTAGTGAACTGCTTTACAATGACTAGACTTGGGAAAGGATCTTTTATAGACCTGGAAgtccaagaaaataaaagtgttaagTACTAGATTTGAAATACCAGACAGTGACTGAAGGCAAAGGAAATACTTTAACAAAGCCCAGTTGTTGTAAATATACACTGTATTAAACACACTATATGAACACACACTGGCGGCCACAACTGTCGGCCATCGATCTGACTGAAATGATTAACTGAATTTTCTGAATGAACGTAATTCAGAAGGAAACTTATTTACCTTCTTAAAGAAATGGCAACATTACACATTTGTCTAACATTTTACTGCAATTTGCTCTCCACAAAGTATCCCTGCTGTTCGCTCGCACACCTGCACCGGTGACGCAGCTTCAGGAATGTAAAGCTGTCTGTCGGTCTCATCATCACTTAAATAAGAAACCATTAATGGTCCTCCCAGCCCCATTCTAATGTTATGAACCTGGCAGGGGAGTGAAAAGCAATCCTTCCATTTTTATTCTTGTATGGTGCCCTTTGTCAGGTTGCCACAGTACAAGCACACGACCAGTATGTCGGTGTTCTGGGAAATGAGGAGAAATAGATCGTCATACATTACTGAAATTGTACACCAGACTGTCCACTATGTGaacctgtgttttattattttttttaacttgttttaacAAAACTGCAAATTTTAGAAATAAGTCTTTGGTCTGTTGTCGGCTGCGCTCCTCAGCAGCATCGCTAGAGTCCAGTTCTTAAAAGCAACTTTTATCACACTTAAGGGACCGGACCGTCCTTTGAAAACATATCTGTTTTTGCAGAGCTTTCGGACCAAGTTGAGAAGATTGTTTACTGTTCTCGTGCTCTTCTGTGTTGATGCTGTTGTTGTGAACGactaattttttatttttctcaagcCAGTGACAGTCAGATTAGTGCATATCTTTCCTCTGAATGCAGCAAGGCTTAGGCAGAGGAGACGGGTTAAAGAGGTGGCTGGGGGCCGGGAGGGATGACTAGTTTAGCTGTTGAGATTCTTTTACTGAGACCTGCAGCAGGTCCGCTGTGTGACTCAAGACCAGCACACTGGCCATGAGCGTCGTCTTTGGCAGAAACATCAGAGACACTGTGGAAGAACTGGGTtatatttggtttggtttctttcTCATGAAACATCTGTAACTACTGTTATTCTCCAGACAGTGGAGTGTGTGCCATTGTCCATTGTAGGTTGTACAACACTGACCATTGACTCTGACTGAGAGGGTGACTGTCCGCAGTGATCAAGTTTGCCCATGTGCTGatgacaaaacacacatttcaaatatcCTTTAGGTCCTCTTTATCTGGGCAAATAAATCGAAGAAGAATGCTAGTGCCTTTCAATAGTGCATTAAGGACTGTGTAACCAAGGGATGTGGGAGGATCTGGAATagtattgcaaatgtaatttatggTTCTACTAATTAGTTTAGCCTTAAAATTGACATGACActtttatgaaaaaatacaaaattgtttaCTGTAAAAATGCAAGAACATTTGAAGGTCCTTTATGAGTATTCCAAATCTGTCCTTTCCAAGCGAATGCCATTTTAAGGGTGGGTTTGAATGCAGATTTCAGGTTCTAAAATAAATGCCTGTGAAGTCTATAATGATTTTCCCAGATTGGGCACAGTATTCTAGTGTGGCAGAACACAGACAAGGAGGTTTCTGTGGACCCGGGGGAATAAAGCAACATTGGAGttgctgcttttaaaaacaaggcGGCGCTGTGCATGCCCACACAAAGGCTACAGAAATAATGTGCTGTATCATCAGTCCTTCCCTAACTAGGATTGCAGCGTGGTTCTGATGCCTTTTCTGTTCCGAGTCGCCTTTGTAAACCGTTCTGTTTTTATGTGAATGGCAGGACGATGACAGATCGTATTGTTCCTGGTTAGAGATCTGGCCTTCAAGTACAGTGAGCTACAAGCAAATACCAGACGTGATGCTGTGTGTGGTCACTGCTTGTGCAGGGTGCTCTGACGGAGTTCAGAGTACAAGGACAGGCAATCTGTGAGTTATGAATGACTTTCGCCTCAAAGCACTGTAGGAAGGTTTGTTTTGGCCTCATCTGCCTTCGTCtgtgaaagaagaaatacaaaaagctGAAAACAGTGGTGCCATGCAATTCATACTTGATATAGTATTAAACGTCACAAGTTTCATCACAAGTCATGGCCCAGTGCTGAAACGTTCTGCTTTTGGAGGATTACATCACAGTTGCTTGTTCTTCTAAGCTGCTTTCACGATCGACAATATAACAGTGTTTGAAATCAGTCTACcactgtgttgttttgtgaaCCGTGTAAACACGCTGTTAAAGAGAaatgtttacatgtgtgttttatgtcCTGTAAAGACTGTTGAATCAGTGCTTTATATCACTGTAAAAGTTGATTAGATCATTCCCAGTCAGTGCCATTCTTGCCAGTGATTGTCTTAACATGACTGTCCACAGATAGAAAGACAGCTATAGTACTTTCAAAGAGTCTTGGTTAAGATGTGAGGTCTGACacgtttaatgtttaatgtcgCTCCACCTGTGCCCTGGGGAGTAGTTTTATAAAAGATGGGCCATACTCGAACGCATCATCAACGTCCTGCTCAAGAGAGAGCACCACATATTGGCATGGATCTTTCTCCATTTTGGTCTGGTAAAAAGGGCTTGAGGTTGAGGAATACCCTTGCTCTTTATTCTTTTCCTGGGTGCTCCACTGACAAAACGTGATATAAAGGCTCCAGAGTCATCTGTGTGCAGCCCATCTTTTGTAAAGCTCTAATGACTTGCCCACGGTTCAGTATAATGAATCACGAGTGAACACCATGTATACCAGAATTACGAGTAAGACTCGTTCTGAACATGAGGTAGGGGAAACAGGCAGGTTCAAAATCCACATTTCTTCTTTTGGGAGTCGGTTGACTTCTCCTGCATATAATGTATAGTTTAGAAAGATCTGCTTTGGATGTGAAGCTTGTTTTGGCCTTGTTGTTCAGTGGTTAAGTGAggcaaagcatttaaaatgtacagtgtcACTCATTACCTATCTACCTCTGCTAGCAGATCACGTATAATAAGTTTGTAGACCCCaaagatttttatttctctgtcaGATATGACACTAAGAAGGTTGCCTCAAAACAAGGAGTAAAAGAAAGGTATCCGTGTATAAGGCGAGTGGGATGTTGTTCCGTGCCAAAGGAGCaaagctttgtttattttgcttttactgaaccatatatatatgtttttatagtcCAATTTAACTTTCTTTGACACCACATCCCTGAACttcatcattatcattttgTCATCTAGTGAAACTCAAGAGGGGagtagaaataaaaatgttgaggTAGACTAGACCAAAGAGGCAGTTTGGTAGTTTATGACCTCTTTAACATATTGCAGTTCTGTACTACTTGAAGGCGGTTCTTCTCTGTCGGACTCTCCACGGCCACACTGGGTTGCTGTCCAACGGTGACTGGTGGACTGTGGTTCCTGTTATGAGCAAAATCTCAGAGTTCATAGCATTGCAGAGGTCAAATACTGTAACTTGAGCCACAATGGCTCTGGAATATCTCCCAGAAGTAGTTTATTCACATCGTATCAATGTAAGGGTTGCTAAATTGGACAATCCATCACAATatgagtttaaatatatatatttttttaattttgccgTGCCAAAGAGTGGAGGGAAGACTAGGTCATGTTCAGCCTTGAAGACATTCACAATTATATTCATCATTGGACCTGTCTGGAAGTGCGTGCGTTCCCAGAACACATTTCTAGGCACCCCGTGACTTGACTTGGTTTCCTGGGCCTCAGTGAACTTGAAGATGTGGGAAGTGCAATCGATTTACTTCCATTGGACATTTTAGCCTCACAGACCAGTACCTTTACACTTTCATTTCGCCCTTTACTGGATTGTACAGCTGTGCGGGGGTTTACGTCTGGACTCTGTAAGGTACTGTTGTTGTCGGTCGTCGCTAAATGTTATGTGCAGCTGTTGTGCAGCAGTCCCGTTACAGTAAGAGTGATTTAGCACCGGAGGATGTCTCTCCGCTTAAAACGTGCGTTGTTGTGACGTAAGTGGGCTTTTATTCCACTCAGTGCCTCGTAAATGCatataatatagtaatatatcTGTACGTACAATATATCTATGTATACTTGTTGTTCCTTTCACACATGGTTCTGCTGGTGTACGTAATAGATATTGAGGTTCAAGTTTTAGACCGCTGTGAGCTTATGTCTCCCAGTTGAGGTATGCTGCTCTTATTGCTTATGTAAAAACTCATTTTTCTGATGGTCAGTATCTTGGTGTATTCTGTAATTTACTGACACATTATCCAAGTTCGTTGtttgaacaaatatgtatattttggggaaaaatgttttttgtaatgttttttttttttttgttatttccgTTTGAACTGTAAATCCAATTGCACtgactgtaatattattttgttttatggatGCATCTAAGTGTACATTTTATGTGTAACatgaatgttaaaatatatataacacaacaAAGCTATGTGTCCAACAACAAGAGGAAATATATAAGTGGACTTTTA

Function

NR:

description
PREDICTED: diacylglycerol kinase theta-like

GO: NA

KEGG:

id description
K00901 dgkA, DGK; diacylglycerol kinase (ATP)

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017965 True 8163 mRNA 0.47 23 30538968 30580996

Neighbor

gene id symbol gene type direction distance location
AMCG00017966 nfkb1 coding downstream 24773 30491226 ~ 30514195 (-)
AMCG00017967 NA coding downstream 48140 30489476 ~ 30490828 (-)
AMCG00017963 cisd2,LOC106602754 coding downstream 99359 30432203 ~ 30439609 (-)
AMCG00017954 NA coding downstream 409654 30121865 ~ 30129314 (-)
AMCG00017955 NA coding downstream 426004 30112290 ~ 30112964 (-)
AMCG00017971 NA coding upstream 24517 30605513 ~ 30607128 (-)
AMCG00017977 NA coding upstream 77630 30658626 ~ 30722050 (-)
AMCG00017976 pigg coding upstream 163975 30744971 ~ 30776441 (-)
AMCG00017974 pigg coding upstream 229408 30810404 ~ 30811335 (-)
AMCG00017975 clg15h9orf72,LOC103354026 coding upstream 251797 30832793 ~ 30848229 (-)
G94483 NA non-coding downstream 77795 30456198 ~ 30461173 (-)
G94482 NA non-coding downstream 78080 30459549 ~ 30460888 (-)
G94392 NA non-coding downstream 429786 30108971 ~ 30109182 (-)
G94359 NA non-coding downstream 536686 29998354 ~ 30002282 (-)
G94358 NA non-coding downstream 541455 29996249 ~ 29997513 (-)
G94533 NA non-coding upstream 29825 30610821 ~ 30614319 (-)
G94563 NA non-coding upstream 137356 30718352 ~ 30721502 (-)
G94577 NA non-coding upstream 398899 30979895 ~ 30980552 (-)
G94590 NA non-coding upstream 798259 31379255 ~ 31380225 (-)
G94598 NA non-coding upstream 876883 31457879 ~ 31458254 (-)
G94238 pla2g12a,LOC108263807,LOC102792247 other downstream 1265800 29269235 ~ 29273168 (-)
G94172 NA other downstream 1663045 28874161 ~ 28875923 (-)
AMCG00017906 elavl2 other downstream 2394379 28098905 ~ 28144589 (-)
AMCG00017902 NA other downstream 2699178 27838251 ~ 27839790 (-)
G93796 NA other downstream 4428894 26109060 ~ 26110074 (-)
AMCG00017972 dcaf10 other upstream 4733 30585729 ~ 30596417 (-)
G94543 NA other upstream 46992 30627988 ~ 30658493 (-)
AMCG00018000 slc1a1 other upstream 1678711 32259707 ~ 32263865 (-)
AMCG00018004 NA other upstream 1690698 32271694 ~ 32276372 (-)
AMCG00018007 NA other upstream 1704489 32285485 ~ 32308080 (-)

Expression


Co-expression Network