AMCG00017973


Basic Information

Item Value
gene id AMCG00017973
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 30656133 ~ 30656924 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017973
ATGAAGTTGAGTGGGAAAGGACTGTGTGCCATCGTGTCCAGCAGCCTGCTCTTCGTCTGCGCCCTGTGCGCCGTCGCCGTCGGGATCCAATGCTTCTTGCAGGGCACCGAAGTAAAAGTGCATTTCCACCTGGGGACGGCGGCCGGGGCTTTTTACTCCGGGGTGCTGGTCTGTCTGGGGCAAACGCTACTGGGGATTGCCCTGCTGTGCTGCCAAGCCAAGCCGGGGAGCCAGAATTTCTTCCTCCTGGGGGTCTTGGTGTTCATGCTGGGGGTCCTCACCGCCTTCTCGGGCGCCGTGATAGACGGCGACACCGTGTCCCTGGTGGAGAGGAAATATTCCCACTACTGCCTGGACTCGGTGGATTTAATCGCCATCTGCGAGCAATTAAAGGATTATCAGAGGAGTCTGGTCATATCCACCATCCTCAACACCCTGGAGTGTCTGTTGGGGCTGGTCAACCTGGTGATCATCAAGAGGTATAAATCTGCCCAGTTCTACCGCAGGAGACTGTCCCAGAGGCAAAGCGTGGGGGCCATCCTCTTCAGCGAGGAGCAGGACCCGGCCGGGGGGGAGTTTCAACCGGTGTCCTACATCAACCTGGGGGTGTTCAACGTTTTGGACGAGGCGGGCGTGGAGGTACAGTGTGGTGGCCATCCCTCGGTGGAGCTGCCAGGCTACTCCCCGACAGACCCAGAGCTGAACCACTCGTACCCCTTCTCTTACCCTCTTCCCAACGAACTGCCCCCCGCGTACGAGGACATTTTCCCCCGGGAAGCGAGCAACACATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017973 True 792 mRNA 0.59 1 30656133 30656924

Neighbor

gene id symbol gene type direction distance location
AMCG00017968 LOC106604549 coding upstream 24898 30620823 ~ 30631235 (+)
AMCG00017969 NA coding upstream 41799 30611050 ~ 30614334 (+)
AMCG00017970 NA coding upstream 51890 30596996 ~ 30604243 (+)
AMCG00017964 NA coding upstream 118669 30520635 ~ 30537464 (+)
AMCG00017960 NA coding upstream 168849 30462864 ~ 30487284 (+)
AMCG00017980 ampm1,metap1,LOC107556924,LOC107733733,LOC106600494,LOC107695030 coding downstream 952294 31609218 ~ 31621106 (+)
AMCG00017982 NA coding downstream 988901 31645825 ~ 31649592 (+)
AMCG00017981 NA coding downstream 1002977 31659901 ~ 31675037 (+)
AMCG00017985 NA coding downstream 1083644 31740568 ~ 31745981 (+)
AMCG00017989 NA coding downstream 1458237 32115161 ~ 32123373 (+)
G94522 dcaf10,LOC102795877 non-coding upstream 64957 30585710 ~ 30591176 (+)
G94505 NA non-coding upstream 111579 30538968 ~ 30544554 (+)
G94348 NA non-coding upstream 675491 29978153 ~ 29980642 (+)
G94310 NA non-coding upstream 1005059 29650790 ~ 29651074 (+)
G94308 bnc2,LOC106936717,LOC106933596,LOC107595060 non-coding upstream 1078730 29577156 ~ 29577403 (+)
G94555 NA non-coding downstream 61254 30718178 ~ 30722318 (+)
G94583 NA non-coding downstream 667600 31324524 ~ 31340832 (+)
G94591 NA non-coding downstream 738222 31395146 ~ 31395366 (+)
G94594 NA non-coding downstream 760925 31417849 ~ 31418120 (+)
G94599 NA non-coding downstream 859904 31516828 ~ 31517029 (+)
G94275 NA other upstream 1205786 29433412 ~ 29450347 (+)
AMCG00017910 NA other upstream 2009383 28631892 ~ 28646750 (+)
AMCG00017898 kcnip4,LOC103360335,LOC100711851,LOC102780455 other upstream 2958754 27472881 ~ 27697379 (+)
AMCG00017886 NA other upstream 3658681 26992891 ~ 26997452 (+)
AMCG00017843 NA other upstream 5603759 25050309 ~ 25052374 (+)
AMCG00017978 NA other downstream 162945 30819869 ~ 30831867 (+)
AMCG00018012 NA other downstream 1750505 32407429 ~ 32425235 (+)
G94838 clcn3,LOC106577864 other downstream 1804374 32461298 ~ 32466636 (+)
G94857 LOC106577504,LOC103385245,LOC108267515 other downstream 1850766 32507690 ~ 32601449 (+)
AMCG00018027 NA other downstream 2132517 32789441 ~ 32793604 (+)

Expression


Co-expression Network