AMCG00017976 (pigg)


Basic Information

Item Value
gene id AMCG00017976
gene name pigg
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 30744971 ~ 30776441 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017976
GAGAGTGAAGGCTCTTTGTCCAATCTCTTGATGCTCTGTGGGGATCATGGGATGTCTGAAACTGGAAGCCATGGGGGATCTTCAGAACATGAGGTTAACACGCCCCTCGTTCTCATCAGCCCAGCCTTCAAGAGAAAAGTGGGCTTCGAGACCCCGCAGTCGGTGGAGCAGGTGGACGTGACTCCCACGCTGTCCCTCGGCCTTGGCCTTCCCATCTCTCAGAACAACGTGGGGCGCCTGATCCTCCCGGTGTTTGAGGAGAGCTCCCTGAGGGATCGGCTCCGATTCCTGCACCTCAACGGCTTGCAGCTGAGCCATCTGATAAAAGACAGCACCCCTTCTTTCGAAAAAGATCCGGGTTATGAACAGTTCAGAATAGCTGAGAAATCCCATGGAAATTGGATGAAGCTGTATTTAGAGGGGAATACGTCAGAGGTCCTGAGCAACATGGGCAAGAAAGTGCTGAAGCAGTACCTGGAGGCCTTGAAGTCAATGAGCTCCTCCCTCAGCAAGCAGCTGGGCAGATACGACATGTATTCCATGATCGTGGGGCTCATCGTTGCCCTCCTCCTGCTTCTCGTCAGCATGGCCGAGGCGCTGAGCAGTGCGGCCGAGGTGGACCTGCCCCTGGCCTCCTCCCTCTGCTCCCTGCCCTTCTACCTGACCTGCCTGTTCTTCTCCGCCGTCCACGTCATGATGTGCACCTCCACCGAGAGCTCCTGCTATTTCTGCAGCCTGTCCTGGGCCCTGGTGTTCGGCGTGATAGTCTTCTTCTCGGCcctgctctgtgttgtgttgtccaTCACTGGCCGGTGGCTCTCCTGGGGGAATCCTCCAGCTAAGCTTGACACCCTGCTGCTCACCGGGACCCTGGGCCACGTGCTGAGCCTAGGGGCCAGCAGTTTTATCGAGGAGGAACACCAGACCTGGTATTTCTTACTCAACACCCTGTGCCTGGCGTTGTTCCAGGACGTCTGCAGGAAGTACTTCAGGGAGAAGAAGAGCTACAAGGATCTAGAAGAAAGCCCCTTCCTGCCCTCCAAAGAGGACGCTCCAACGCCGAGCTATGGGCCGAGAGGCAGCAATGAGAAGTGGCTGGCCTTGGCCACTCCCTTGGTCAGTCTGGCGTGCTGTCGCGTGCTCCGCTCCTTGAACCAGACAGGTGTGCAGTGGGCTCATCTCCCGGACCTTGGGCACTGGCTGAACAGCTCCGAGCACAATGTCGCGCTCTCCCTTCTTGCCGCGGCCTCCCTGGCCCTCATCTTCTCCCTGGTGCAGCGGCGGTGCTCTCTGGTCTCTAAAGTAGCCCTGGCGTTGGGCCTGCTGGGCGTCTACAGCTACCGGGCCGCCGTCGGCAATGTGCTGTTCCCATGGCAACGGGATGGGAGAGACATCTCCAAGTAA

Function

symbol description
pigg Predicted to enable mannose-ethanolamine phosphotransferase activity. Predicted to act upstream of or within GPI anchor biosynthetic process. Predicted to be located in endoplasmic reticulum and membrane. Predicted to be integral component of membrane. Human ortholog(s) of this gene implicated in autosomal recessive non-syndromic intellectual disability. Orthologous to human PIGG (phosphatidylinositol glycan anchor biosynthesis class G).

NR:

description
PREDICTED: GPI ethanolamine phosphate transferase 2 isoform X3

GO: NA

KEGG:

id description
K05310 PIGG, GPI7; ethanolamine phosphate transferase 2 subunit G

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017976 True 1404 mRNA 0.58 6 30744971 30776441

Neighbor

gene id symbol gene type direction distance location
AMCG00017977 NA coding downstream 22921 30658626 ~ 30722050 (-)
AMCG00017971 NA coding downstream 137843 30605513 ~ 30607128 (-)
AMCG00017965 LOC107749781 coding downstream 163975 30538968 ~ 30580996 (-)
AMCG00017966 nfkb1 coding downstream 230776 30491226 ~ 30514195 (-)
AMCG00017967 NA coding downstream 254143 30489476 ~ 30490828 (-)
AMCG00017974 pigg coding upstream 33963 30810404 ~ 30811335 (-)
AMCG00017975 clg15h9orf72,LOC103354026 coding upstream 56352 30832793 ~ 30848229 (-)
AMCG00017979 NA coding upstream 204609 30981050 ~ 30982903 (-)
AMCG00017983 eif4e,LOC107730661,LOC107696296,LOC105908755,LOC107680975 coding upstream 823217 31599658 ~ 31607699 (-)
AMCG00017984 adhx,LOC107379637,LOC106924987,LOC103137353,LOC106961688,LOC105936217,LOC103471823 coding upstream 846504 31622945 ~ 31644198 (-)
G94563 NA non-coding downstream 23469 30718352 ~ 30721502 (-)
G94533 NA non-coding downstream 130652 30610821 ~ 30614319 (-)
G94483 NA non-coding downstream 283798 30456198 ~ 30461173 (-)
G94482 NA non-coding downstream 284083 30459549 ~ 30460888 (-)
G94392 NA non-coding downstream 635789 30108971 ~ 30109182 (-)
G94577 NA non-coding upstream 203454 30979895 ~ 30980552 (-)
G94590 NA non-coding upstream 602814 31379255 ~ 31380225 (-)
G94598 NA non-coding upstream 681438 31457879 ~ 31458254 (-)
G94600 NA non-coding upstream 740391 31516832 ~ 31517036 (-)
G94622 NA non-coding upstream 845159 31621600 ~ 31622378 (-)
G94543 NA other downstream 86478 30627988 ~ 30658493 (-)
AMCG00017972 dcaf10 other downstream 148554 30585729 ~ 30596417 (-)
G94238 pla2g12a,LOC108263807,LOC102792247 other downstream 1471803 29269235 ~ 29273168 (-)
G94172 NA other downstream 1869048 28874161 ~ 28875923 (-)
AMCG00017906 elavl2 other downstream 2600382 28098905 ~ 28144589 (-)
AMCG00018000 slc1a1 other upstream 1483266 32259707 ~ 32263865 (-)
AMCG00018004 NA other upstream 1495253 32271694 ~ 32276372 (-)
AMCG00018007 NA other upstream 1509044 32285485 ~ 32308080 (-)
G94835 NA other upstream 1678644 32455085 ~ 32456410 (-)
AMCG00018021 ank2,LOC106577504,LOC106608576 other upstream 1824748 32601189 ~ 32605751 (-)

Expression


Co-expression Network