AMCG00017981


Basic Information

Item Value
gene id AMCG00017981
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 31659901 ~ 31675037 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017981
ATGGAAGAACCATCCACTTCAAGCGCTCAGAGTTGCACCATGGCGAGCACAATGAGTGCCAAGACCCGCTCGGTATATTACGAGCTGATGCTGGAAGGGCAGGTGTGCGATGTGATGATAATTGTGAACGGCACAGCATTCAATGCCCACAAGATCATCTTGTGTGGCTGCAGTGAGTATTTCCGAGTCCTGTTCTCCAGTGATGACTGGaacacagagaggagggaggttAACATCCCAGGTGTCTCCCCAGAGATGATGAAACTCATCATCCAGTACGCCTACACCCTTACCGTACCCATCTGCCCCAACAACGTGCAGGAGCTACTGGTAGCGGCCGACCAGTTTGCGGTGCTGGGCCTCCTGAGAACCTGCTGCAACTTCCTGGAGGCCCAGCTGTGCATTGAGAACTGCATCGGCATTTCCCAGATTGCCGAATTGCACTTCTGCACTGAGCTCCATCGTGTGGCCCACCTTTACATCCGGCACAACTTTGAGCCCGTGGCCAAGGCCTCTGAGGAGTTCCTGGCGCTCTCTCTGGACCAGCTAACCAACATCATCGAAAAGGACGACCTCAACGTCAACCAGGAGGATGTGGTGCGGTTGGCACTCATGGAGCCAGAATACTTCATGACCAAAGTGAAGAACAATGAGCTGGTGAAGCAGACCGATGAGTGCAAGCCTATTGTCATTGATGCACTCACGGTCATGTATGACCTCAACATCAATGGCCAGTCCATCTCGAACTTCCGCAACCCCATGACCCGGCCACGGCTTCCCTATGCCATCTTGTTAACAATCGGGGGCTGGAGTCGGAACAGCCCCACCAACAGCATGGAGGCCTACGACAGCAGGGCTAACCGCTGGGTGGACGTCACCATGCCGGAGGAGTACCCACGGGCCTACCACGGGGTCGCCTACCTCAAGGGCTGGGTGTACTGCGTGGGCGGCTTTGACAGCATGGATTACTTCAGCAGCGTGCGCAAGTTCAATCCTGTGGCACGCACTTGGCACGAGGTGGCACCCATGCACTCCCAGCGCTGCTACGTCAGTGTGGTTGTGCTGGACGGCTTCATCTACGCCATGGGTGGCTTCGACAGCAATGTGCGGCACAACACGGCCGAGCGCTACGAGCCCGAGACCAACCAGTGGACGCTGATCGCACCCATGAACGAGCAGAGGAGCGACGCCAGCGCCACCACCCTGCACGGCAAGGTGTACATCTGCGGGGGATTCAATGGAAACGAGTGTCTCAGGACATCAGAAACGTACAGCCCAGAGACCAACCAGTGGACCGCCATCGCCCCCATGTCGAGCAGGCGCACCGCTGTGGGTGTGATCGCCTTTGAGGACTACGTGTATGCGGTGGGTGGCTTTGATGGGACAAACCGTCTGCGGACCGTAGAGGTCTACAACCCGCTGACCAACAGCTGGCACCTGATACCCAGCATGTGCTCCGCTCGCAGCAACTTCGGCATTGAGGTGGTGGAAGACTGCTTGTTCGTGGTGGGCGGCTTCAATGGCATCACCACCACCGCCTCTGTGGAGTGCTATGATAAAGAGGCAAATGAGTGGTACGATGCTTGTGACATGAGCTTCTCCCGCAGCGCACTCAGTTGCTGTGTGCTGCCAGGGCTGCCCAACAGTTGCACCATGGCGAACACCATGAGTGCCACGACCCGCTCGGTATATTACGAGCTGATGCTGGAAGGGCAGGTGTGCGATGTGATGATAATTGTGAACGGCAAAGCATTCAATGCCCACAAGATCATCTTGTGTGGCTGCAGCGAGTATTTCCGATTCCTGTTCTCCAGCGATGACTGGaacacagagaggagggaggttAACATCCCCGGTGTCTCCCCAGAGATGATGAAACTCATCATCCAGTACGCCTACACCCTTACCGTACCCATCACCCCCAACAACGTGCAGGAGCTACTGGTAGTGGCCAACCAGTTGGCGATGCTGGATCTAATGCAAACCTGCTGCAACTTCCTGGAGGCCCAGCTGTGCATTGAGAACTGCATCGGCATTTCCCAGATTGCCGAATTGCACTTCTGCACTGAGCTCCATCGTGTGGCCCACATTTACATCCGGCACAACTTTGAGCCCGTGGCCAAGGCCTCTGAGGAGTTCCTGGTGCTCTCTCTGGACCAGCTAACCAACATCATCGAAAAGGACGACCTCAACGTCAAGCAGGAGGATGTGAGGTTCACTGTAGAGGAGCCGAACCAATCGACCAACTTCTTCCTTGTCCTACAGGTGCGGATGGCACTCATGGAGTCAGAATACTTCATGACCAAAGTGAAGAACAACGAGCTGGTGAAGCAGACCGACGAGTGCAAGCCTATTGTCATTGATGTGCTCAAGGCCATGTATGACCTTAATATCAATGGCCTGTCTGACTTGGACTTCTGCAACCCCATGACCCGGCCGCGGCTTCCCTATGCCATCCTGTTGTCAATCGGGGGCTGGAGTGGGGAAAGCCCCACCAATGTCATGGAGGCCTACGACAGCAGGGCTAACCACTGGGTGGACGTCACCATGCCGGAGGAGAGCCCACGGGCCTACCACGGGGTCGCCTACCTCAAGGGCTGGGTGTACAGCGTTGGCGGCTTCAATGGCATGGATTACTTCAGCAGCGTGTGCAAGTTTGATCCTGTGGCACGCACTTGGCACGAGGCAGCACCCATGCACTCCCAGCGCTGCTACGTCAGTGTGGTTGTGCTGGATGGCTTCATCTACGCCATGGGGGGCTTCAATGGGGAACACCGGCTCAGCTTGGCCGAACGCTACGAGCCCGAGACCAACCAGTGGACCCTGATCACACCCATGAACGAGCAGAGGAAAACGTACAGCCCAGAGACCAACCAGTGGACCGCCATCGCCCCCATGTCAAACAGGCGCAGCGGGGTGGGCGTCATCGCCTATGAGAACCACGTGTATGCGGTGGGCGGCTTTGACGGGACGAACCGCCTGCGGACCGTAGAGGCCTACAACCCGCTGACCAACAGCTGGCACCCTATACCCAGCATGTACATTCCACGCAGCAACTTTTGCATTGAGGTGGTGGAAGACTGCGTGTTCGTGGTGGGCGGCTTCAACGGATTCTCCGCCACCGCCTCTGTGGAGTGCTATGATAAAGAGGCAAATGAGTGGTACGATGCTTGTGACATGAGCTTCTCCCGCAGCGCACTCAGTTGCTGTGTGCTGCCAGGGCTGCCCAACATGGCCGACTATACCATCCCCCGAGATGCCCTGCTGCCCGACTCTCTGCAAGAGGAGACACTGTCCTGCACATACAGCCTCCCCTCCTCACCTCATGACCCCTGGTCATTGATAGACTATCATTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017981 True 3357 mRNA 0.57 10 31659901 31675037

Neighbor

gene id symbol gene type direction distance location
AMCG00017982 NA coding upstream 10309 31645825 ~ 31649592 (+)
AMCG00017980 ampm1,metap1,LOC107556924,LOC107733733,LOC106600494,LOC107695030 coding upstream 38795 31609218 ~ 31621106 (+)
AMCG00017973 NA coding upstream 1002977 30656133 ~ 30656924 (+)
AMCG00017968 LOC106604549 coding upstream 1028666 30620823 ~ 30631235 (+)
AMCG00017969 NA coding upstream 1045567 30611050 ~ 30614334 (+)
AMCG00017985 NA coding downstream 65531 31740568 ~ 31745981 (+)
AMCG00017989 NA coding downstream 440124 32115161 ~ 32123373 (+)
AMCG00017996 NA coding downstream 506665 32181702 ~ 32186561 (+)
AMCG00018002 NA coding downstream 516712 32191749 ~ 32194198 (+)
AMCG00017995 LOC107558400,LOC106943316 coding downstream 537142 32212179 ~ 32217730 (+)
G94613 NA non-coding upstream 30588 31628605 ~ 31629313 (+)
G94609 NA non-coding upstream 36358 31622456 ~ 31623543 (+)
G94601 eif4e,if4ea,LOC103354029,LOC107085786,LOC107730661,LOC105908755,LOC107696296 non-coding upstream 56789 31599760 ~ 31603112 (+)
G94599 NA non-coding upstream 142872 31516828 ~ 31517029 (+)
G94594 NA non-coding upstream 241781 31417849 ~ 31418120 (+)
G94664 NA non-coding downstream 92599 31767636 ~ 31767848 (+)
G94668 NA non-coding downstream 184957 31859994 ~ 31864202 (+)
G94681 NA non-coding downstream 223465 31898502 ~ 31899680 (+)
G94713 NA non-coding downstream 416383 32091420 ~ 32093044 (+)
G94739 NA non-coding downstream 489782 32164819 ~ 32165297 (+)
AMCG00017978 NA other upstream 828034 30819869 ~ 30831867 (+)
G94275 NA other upstream 2209554 29433412 ~ 29450347 (+)
AMCG00017910 NA other upstream 3013151 28631892 ~ 28646750 (+)
AMCG00017898 kcnip4,LOC103360335,LOC100711851,LOC102780455 other upstream 3962522 27472881 ~ 27697379 (+)
AMCG00017886 NA other upstream 4662449 26992891 ~ 26997452 (+)
AMCG00018012 NA other downstream 732392 32407429 ~ 32425235 (+)
G94838 clcn3,LOC106577864 other downstream 786261 32461298 ~ 32466636 (+)
G94857 LOC106577504,LOC103385245,LOC108267515 other downstream 832653 32507690 ~ 32601449 (+)
AMCG00018027 NA other downstream 1114404 32789441 ~ 32793604 (+)

Expression


Co-expression Network