AMCG00017988


Basic Information

Item Value
gene id AMCG00017988
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 31892473 ~ 31894806 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017988
ATGAACATCGCACACAATCCTGGAATCTGTGTGTCCCTCCACCGCAGCTCGGCGAAGCCGTGCGCGGCCCTGGTGGGAGCAGACCAGCCCCTGTGCCCCGACCTCCCTGAGCTCGACCTCTCTGAGCTGGACGTCAGTGACCTGGACGCCGATAGCTTTCTGGGCGGACTCAAATGGTACAGCGACCAATCGGAGATCATTTCCAATCAGTACGGCAGCGAGTCCGCCAACCTGTTCGAGGGCCAGCCATCGTGGGTCACTGCCGCAGGTTATCTGATCGCAAAAGACAGACGGGGCAGTGGGATTAATGAATTACCAGATCTTGCGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017988 True 330 mRNA 0.58 3 31892473 31894806

Neighbor

gene id symbol gene type direction distance location
AMCG00017987 ppargc1a,LOC106577610,LOC106608616 coding downstream 8795 31862729 ~ 31883678 (-)
AMCG00017986 NA coding downstream 177040 31692327 ~ 31715433 (-)
AMCG00017984 adhx,LOC107379637,LOC106924987,LOC103137353,LOC106961688,LOC105936217,LOC103471823 coding downstream 248275 31622945 ~ 31644198 (-)
AMCG00017983 eif4e,LOC107730661,LOC107696296,LOC105908755,LOC107680975 coding downstream 284774 31599658 ~ 31607699 (-)
AMCG00017979 NA coding downstream 909570 30981050 ~ 30982903 (-)
AMCG00017991 dhx15,LOC107691839,LOC107699613 coding upstream 193341 32088147 ~ 32111464 (-)
AMCG00017992 ccdc149b,LOC105908379,LOC107671163,LOC107748825 coding upstream 228324 32123130 ~ 32140451 (-)
AMCG00017990 NA coding upstream 249010 32143816 ~ 32151676 (-)
AMCG00017993 sepsecs coding upstream 260965 32155771 ~ 32163981 (-)
AMCG00017994 NA coding upstream 269257 32164063 ~ 32173862 (-)
G94665 NA non-coding downstream 63673 31828459 ~ 31828800 (-)
G94655 LOC100709447,LOC101481844,LOC102214071,LOC102780160,LOC106514855,LOC108234835 non-coding downstream 150814 31741224 ~ 31741659 (-)
G94622 NA non-coding downstream 270095 31621600 ~ 31622378 (-)
G94600 NA non-coding downstream 375437 31516832 ~ 31517036 (-)
G94598 NA non-coding downstream 434219 31457879 ~ 31458254 (-)
G94747 NA non-coding upstream 297377 32192183 ~ 32196606 (-)
G94791 NA non-coding upstream 450444 32345250 ~ 32346583 (-)
G94927 NA non-coding upstream 894973 32789779 ~ 32790688 (-)
G94936 NA non-coding upstream 953460 32848266 ~ 32848466 (-)
G94543 NA other downstream 1233980 30627988 ~ 30658493 (-)
AMCG00017972 dcaf10 other downstream 1296056 30585729 ~ 30596417 (-)
G94238 pla2g12a,LOC108263807,LOC102792247 other downstream 2619305 29269235 ~ 29273168 (-)
G94172 NA other downstream 3016550 28874161 ~ 28875923 (-)
AMCG00017906 elavl2 other downstream 3747884 28098905 ~ 28144589 (-)
AMCG00018000 slc1a1 other upstream 364901 32259707 ~ 32263865 (-)
AMCG00018004 NA other upstream 376888 32271694 ~ 32276372 (-)
AMCG00018007 NA other upstream 390679 32285485 ~ 32308080 (-)
G94835 NA other upstream 560279 32455085 ~ 32456410 (-)
AMCG00018021 ank2,LOC106577504,LOC106608576 other upstream 706383 32601189 ~ 32605751 (-)

Expression


Co-expression Network