AMCG00018007


Basic Information

Item Value
gene id AMCG00018007
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 32285485 ~ 32308080 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018007
ATGACTCAAGAGCTCGGTATGATGATGAAGAAGGCGATGCGCGGCTTCAGGATCTTCGTCGGGAGGAACTGGCTGCTGGTCTCCACCGTGAGTGCTGTGCTGCTGGGAGTGGCCAGCCTGGACTCGGGGATGTCTGGCCGGATTGGGTTGCGTGCAGTCGTGTATTACTTATCAACGACCGTTTTGGCTGCCATCCTGGGCATCGTGCTGGTGATGACCATCCAGCCCGGTGTGTCTCAGAGCACTGAGGACATCGACAGGACCCACTCTGCCACAAGGGTCAGCACAGTGGACTCCATGCTGGACCTCCTCAGGAACATGTTTCCTGAGAATCTCGTCCAGGCTTGTTTCCAATCGCCGCCCAGCAGACCTGAGGGGAACAGCACCGCCGCTGCCGCTGTGACCACCATCATGACAACCGCAGCGCTGGAGAACGTGACCAAGGACTACAAGATCGTGGGCCAGTATTCGGACGGCATCAACATGCTGGGCCTCATCGTGTTCTGCCTGGTCTTCGGGCTGCTCGGGCTCTACATGCTGACCGTGCTGAGCGGACTGGCTATTCATACTCTTATCGTCCTCCCATTGTTGTACTTCATCTTCGTGAGGAAGAACCCGTACAAGTTTGCACTGGGGATGTCCCAGGCGATGGTCACCGCTCTGATGATCTCCTCCAGCTCGGCTACGTTGCCGGTGACCATTCGATGCGCAGAGCAGAACAACAGAATTGACAAGAGGATCACACAGTTCATGTTGCCAATCGGCGCCACCATCAACATGGACGGCTCTGCCCTCTATGAGGCCGTGGCGGCCGTCTTCATTGCACAGCTGGGCAACTATGCGCTGGACATTGGCCAGATCGTGACCATCAGTGTAACGTCCACCCTGGTCAGCATCGGAGCAGCAGGAATCCCCTCTGCCGGGCCAGTGTCCATCCTGATCGTCCTGTCCGCAGTGGGCCTTCCCTACGACGACGTCATGGTCCTCTTCGCCGTCGACTGGCTGGTTGATCGTTTCCGCACCATGATCAATGTGCTGGGAGACGCCTTCGGGGCCGGGATCGTGCATAAGCTCTCtgagaaggagctggagcagatgGGGCAGATGGACCAGGAACTCAGTAGGGATGCATTCAGGCCCTTCTCTCTGGAGGCTCCAATGGATGAGGAGGAGTCAGAGAAAAAGATTTATGACAACGGCGGCTTTGTTGAGGATATGAATGAGTCGGACTCATACACCAAGATATCTCAGCTTTAG
>TU118217
GGCATCGTGCTGGTGATGACCATCCAGCCCGGTGTGTCTCAGAGCACTGAGGACATCGACAGGACCCACTCTGCCACAAGGGTCAGCACAGTGGACTCCATGCTGGACCTCCTCAGGAACATGTTTCCTGAGAATCTCGTCCAGGCTTGTTTCCAATCGTACAAGACCAAGCGCTCAGAGCTGAAGCCGCCCAGCAGACCTGAGGGGAACAGCACCGCCGCTGCCGCTGTGACCACCATCATGACAACCGCAGCGCTGGAGAACGTGACCAAGGACTACAAGATCGTGGGCCAGTATTCGGACGGCATCAACATGCTGGGCCTCATCGTGTTCTGCCTGGTCTTCGGGCTGGTCATCGGCCAGATGGGCGAGAGG

Function

GO:

id name namespace
GO:0005215 transporter activity molecular_function

KEGG:

id description
ko04614 Renin-angiotensin system
ko04976 Bile secretion
ko04974 Protein digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018007 True 1257 mRNA 0.57 11 32285485 32308080
TU118217 False 375 TUCP 0.59 4 32294020 32295433

Neighbor

gene id symbol gene type direction distance location
AMCG00017998 NA coding downstream 37307 32233851 ~ 32248178 (-)
AMCG00017999 zgc:136353 coding downstream 74519 32199753 ~ 32210966 (-)
AMCG00017994 NA coding downstream 111623 32164063 ~ 32173862 (-)
AMCG00017993 sepsecs coding downstream 121504 32155771 ~ 32163981 (-)
AMCG00017990 NA coding downstream 133809 32143816 ~ 32151676 (-)
AMCG00018006 LOC108437089,LOC103038323,LOC107561515,LOC107738333,LOC107691852 coding upstream 39415 32347495 ~ 32360816 (-)
AMCG00018009 NA coding upstream 72432 32380512 ~ 32381489 (-)
AMCG00018008 NA coding upstream 73470 32381550 ~ 32387686 (-)
AMCG00018015 NA coding upstream 116945 32425025 ~ 32429565 (-)
AMCG00018016 NA coding upstream 153514 32461594 ~ 32478852 (-)
G94747 NA non-coding downstream 88879 32192183 ~ 32196606 (-)
G94665 NA non-coding downstream 456685 31828459 ~ 31828800 (-)
G94655 LOC100709447,LOC101481844,LOC102214071,LOC102780160,LOC106514855,LOC108234835 non-coding downstream 543826 31741224 ~ 31741659 (-)
G94622 NA non-coding downstream 663107 31621600 ~ 31622378 (-)
G94600 NA non-coding downstream 768449 31516832 ~ 31517036 (-)
G94791 NA non-coding upstream 37170 32345250 ~ 32346583 (-)
G94927 NA non-coding upstream 481699 32789779 ~ 32790688 (-)
G94936 NA non-coding upstream 540186 32848266 ~ 32848466 (-)
AMCG00018004 NA other downstream 9113 32271694 ~ 32276372 (-)
AMCG00018000 slc1a1 other downstream 21620 32259707 ~ 32263865 (-)
G94543 NA other downstream 1626992 30627988 ~ 30658493 (-)
AMCG00017972 dcaf10 other downstream 1689068 30585729 ~ 30596417 (-)
G94238 pla2g12a,LOC108263807,LOC102792247 other downstream 3012317 29269235 ~ 29273168 (-)
G94835 NA other upstream 147005 32455085 ~ 32456410 (-)
AMCG00018021 ank2,LOC106577504,LOC106608576 other upstream 293109 32601189 ~ 32605751 (-)
G94887 NA other upstream 340384 32648464 ~ 32652684 (-)
AMCG00018020 LOC105907237,LOC101472930 other upstream 347950 32656030 ~ 32665115 (-)

Expression


Co-expression Network