AMCG00018008


Basic Information

Item Value
gene id AMCG00018008
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 32381550 ~ 32387686 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018008
GTGCTGGCAGAGCGAATACAGGGCCTCAGTTTTGCCTGAGCCCGGAGACACACACCGCTCTTGGGTTTGCTCTGAACCGTGAGTGGCTTCATTGGTTTGGTCCATTTAATAGATCTTTGTTTATTGCTTTCAAGCTGCTATAAATCCTGCAGGACCTGCCTCGGCCTCATGATGTCTAAAGGCTGTAAGATATATTGTTTTGATAAACATGCAGTTCtgataaatacatgaatattgGAATTAACAAAGATCAGAGCAGTTTAAACCGTCTCTGTCACTCTGTATTCCCCTCAACACCGTCTTTTCGTCGGCAGAAAAACGTCCTGAGAAAACAGAAGAACTGGGAGAAGACACTGGCGGCAAAGAAAGgcaggaggaaggaggagaaaCAACGAAAGAAGCTGAGACAAGCTGAAGAGTCAGGGAGCGCACCGGACAGCCCACGGCACAGTAAGCGAGTCGTCAAGGCCATCACCAGAGAGAGGCTGCTGGGGGCCGCAGACGGGGGCCCCAGACTCTGCGTGGATTTGAGCATGACAGGCTGCATGTCTCACAAGGAGCTAAGTCGTCTGGCCGGTCAGATACGAAGGCTGTATGGCTCCAACCGGAGGGCTGCCCGTCCCTTCCACCTGTACCTGGCCGAGCTGCGGGCCGACAGTCAGCTGTACAGGGAGTGTGTGCGGAAGAACGCCGGCTTTGAGAACTATGTGATGGATGTGACGGAGCGGAGCTGCCTGCAGCTGTTCCCCCGGGAGAGTGTGGTCTACCTGACGCCAGACTCGGAGGACGTCTTGGAGCACGTTGATCCTGAGAAGGTGTACATCCTGGGGGGGCTGGTGGATGAAAGCGTTCAGAAGAAGCTGACGTACCAGAAGGCCAGGCAGAGCCAGCTGAGCACTGCCAGGCTGCCCATCGACGAGTACATGGTCAAGAAGGACAACGACAAGAACTTCCACTCCAAGATCCTGGCCATCAATCAGGTGTTCGACATCTTGCTGCGCTTCCGGGAGACGGGCAGCTGGTCGGCGGCCCTGCAGGCGGGGGTGCCGCCGGGGAAGGGCTACGTCAAGACGGTGCAGGCCAGGGACCCGCCAGCAGAGCCTGAGCCCTCCTCACCGCCGGACCAGTCAGCCCTGCAGGAGACTCTCGGCTGCCTTCGCTCCGTCACCGCTTCTCTGTCTTTGAAGGACCGGGGCAGCCTGCGTGTGGAGAGTGGGGGTCTGCAGCCCTGGGCCCGGACCCGCCCCTTCAGCCAGACAGTCGGCAACCAGGAGGCTGAGCGCCAGCCACGGGAAACTGCAGGCgcccagcagccccagcagcaCAGCGCCTCCGTGCGCACATCTACCCCCGACACGGTACTCTGCCCCGGGGCCGATGCCAGCCTCGCCGCTGCCGCAGTCGCCAGGGCCGGAAGTCCCTCCCCGCGGCGCCCCATTGGCGCAGACAGGCGCCCGCCCTTGTCGTCGCTGCCGTCCCCCTTTCTGAGCGCTTGTTTGGACGCCGAGGCCCAGTCCGCCCGGGATGAGATGATGCTCCGTGTCTCCCGACGCCCAGAAGAGGAAGACGAGGCCGAGGAAGAGTAA

Function

GO: NA

KEGG:

id description
K15445 TRMT10, TRM10, RG9MTD; tRNA (guanine9-N1)-methyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018008 True 1586 mRNA 0.60 11 32381550 32387686

Neighbor

gene id symbol gene type direction distance location
AMCG00018009 NA coding downstream 61 32380512 ~ 32381489 (-)
AMCG00018006 LOC108437089,LOC103038323,LOC107561515,LOC107738333,LOC107691852 coding downstream 20734 32347495 ~ 32360816 (-)
AMCG00017998 NA coding downstream 133372 32233851 ~ 32248178 (-)
AMCG00017999 zgc:136353 coding downstream 170584 32199753 ~ 32210966 (-)
AMCG00017994 NA coding downstream 207688 32164063 ~ 32173862 (-)
AMCG00018015 NA coding upstream 37339 32425025 ~ 32429565 (-)
AMCG00018016 NA coding upstream 73908 32461594 ~ 32478852 (-)
AMCG00018023 camk2d1,LOC107732596,LOC105907237 coding upstream 292901 32680587 ~ 32684608 (-)
AMCG00018025 NA coding upstream 300695 32688381 ~ 32690871 (-)
AMCG00018024 NA coding upstream 307274 32694960 ~ 32713623 (-)
G94791 NA non-coding downstream 34967 32345250 ~ 32346583 (-)
G94747 NA non-coding downstream 184944 32192183 ~ 32196606 (-)
G94665 NA non-coding downstream 552750 31828459 ~ 31828800 (-)
G94655 LOC100709447,LOC101481844,LOC102214071,LOC102780160,LOC106514855,LOC108234835 non-coding downstream 639891 31741224 ~ 31741659 (-)
G94622 NA non-coding downstream 759172 31621600 ~ 31622378 (-)
G94927 NA non-coding upstream 402093 32789779 ~ 32790688 (-)
G94936 NA non-coding upstream 460580 32848266 ~ 32848466 (-)
AMCG00018007 NA other downstream 73470 32285485 ~ 32308080 (-)
AMCG00018004 NA other downstream 105178 32271694 ~ 32276372 (-)
AMCG00018000 slc1a1 other downstream 117685 32259707 ~ 32263865 (-)
G94543 NA other downstream 1723057 30627988 ~ 30658493 (-)
AMCG00017972 dcaf10 other downstream 1785133 30585729 ~ 30596417 (-)
G94835 NA other upstream 67399 32455085 ~ 32456410 (-)
AMCG00018021 ank2,LOC106577504,LOC106608576 other upstream 213503 32601189 ~ 32605751 (-)
G94887 NA other upstream 260778 32648464 ~ 32652684 (-)
AMCG00018020 LOC105907237,LOC101472930 other upstream 268344 32656030 ~ 32665115 (-)

Expression


Co-expression Network