AMCG00018024


Basic Information

Item Value
gene id AMCG00018024
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 32694960 ~ 32713623 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018024
ATGAGATTCACGAATGATTCAGTGCGCTGCCCCGGCAAGAGAGGCTTCATTTCAGAATCTGACTGGGCTCCCGAGGAGAGGCGGGCCGACAGCAGTGCCACCACATCAGTACATCAGCCAGCCTCGGTGCTGGCTGCAGTCATCAGCACACAGCCCGGTGAACACGAACCCTGTGCCTCCCCCAGACCCCCAGGTGGCTCTGGGTTCTgtcgtCAGCAGGTTAATGAGTCTCTCTGCACTGAGATCGCACTCAGGGGCTCTGCCATGCCCTCCCCCGGGCCACGCCGgtgcctgcctgtctgtgggCTCCACGGGGAGGACCAGGCTGTAATTGTCCGCCTCCGGTCTCTGAGCGCCACAGCAAGAGAGGCTGCAGTTGGGAAAGTAGGCCAGACCTCGCGGCAGGCCGTACGGCACTGCCCGGCCCCTGAGGCAAGCAGGTCTCGACAAAACCCTGCGCACAGACGCATCCTCAGCGCTGTTCGCACAGTGAGGGAGGTGTATCATCAGAAGCTGGAAAGGGAAGCGAGAATCTGCCGCCTGCTGAAGCACCCCAACATCGTAGAGAGGATAGAGACCTATGGTATGAGCTTCTATAGCGTCCTGGACTGGCCTATAGCCTCCAGTGCAATAAAGGTGTGGGGAAGAGCCTCGTTCCGCAGCGCCGCATCCCTGAGCTGCCGTTCGTTTAGCTTCTCCTTCTACCTCTTTTcctccttcctcttctccttctccttcattTTTAACAAGTTCGACCCGCTGACAGCCAGCCAGCGCAGGAGAAATGACTCACGCCAGGCGGTGTGTCTCCGGGCGGTGAGACTCCACGACAGCATATCGGAAGAAGGATTTCACTACCTAGTCTTCGATTTAGTAACTGGAGGCGAATTGTTTGAAGACATTGTAGCCAGAGAATACTACAGTGAAGCTGATGCAAGTCATTGTATACAGCAGATTCTAGAAAGTGTAAATCATTGCCACCTAAATGGCATAGTGCACAGAGACCTGAAGCAGATCCTGGAGGCCGTGCTCCACTGCCATCAGATGGGTGTGGTCCACCGGGACCTCAAGGTCTGCCGTGTGTTTGGGCTGGATGTAGCAATCCTGTTCAGTCTGCCGGACCGGCGCCAGTCACCGGATGCCTTCATTGAGCCCCGGTGCTGCGGGCCGACCGTCCTTCTGCGCAGGCGGGTTTAA

Function

GO:

id name namespace
GO:0035295 tube development biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018024 True 1197 mRNA 0.57 13 32694960 32713623

Neighbor

gene id symbol gene type direction distance location
AMCG00018025 NA coding downstream 4089 32688381 ~ 32690871 (-)
AMCG00018023 camk2d1,LOC107732596,LOC105907237 coding downstream 10352 32680587 ~ 32684608 (-)
AMCG00018016 NA coding downstream 216108 32461594 ~ 32478852 (-)
AMCG00018015 NA coding downstream 265395 32425025 ~ 32429565 (-)
AMCG00018008 NA coding downstream 307274 32381550 ~ 32387686 (-)
AMCG00018022 LOC106523896,LOC108436153,LOC103388877 coding upstream 53622 32767245 ~ 32776080 (-)
AMCG00018029 LOC103388830 coding upstream 82261 32795884 ~ 32819447 (-)
AMCG00018028 NA coding upstream 123008 32836631 ~ 32847899 (-)
AMCG00018032 NA coding upstream 138181 32851804 ~ 32864532 (-)
AMCG00018031 NA coding upstream 153698 32867321 ~ 32889902 (-)
G94791 NA non-coding downstream 348377 32345250 ~ 32346583 (-)
G94747 NA non-coding downstream 498354 32192183 ~ 32196606 (-)
G94665 NA non-coding downstream 866160 31828459 ~ 31828800 (-)
G94655 LOC100709447,LOC101481844,LOC102214071,LOC102780160,LOC106514855,LOC108234835 non-coding downstream 953301 31741224 ~ 31741659 (-)
G94622 NA non-coding downstream 1072582 31621600 ~ 31622378 (-)
G94927 NA non-coding upstream 76156 32789779 ~ 32790688 (-)
G94936 NA non-coding upstream 134643 32848266 ~ 32848466 (-)
AMCG00018020 LOC105907237,LOC101472930 other downstream 29845 32656030 ~ 32665115 (-)
G94887 NA other downstream 42276 32648464 ~ 32652684 (-)
AMCG00018021 ank2,LOC106577504,LOC106608576 other downstream 89209 32601189 ~ 32605751 (-)
G94835 NA other downstream 238550 32455085 ~ 32456410 (-)
AMCG00018007 NA other downstream 386880 32285485 ~ 32308080 (-)

Expression


Co-expression Network