AMCG00018028


Basic Information

Item Value
gene id AMCG00018028
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 32836631 ~ 32847899 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018028
TGGGAATGAGGTGGTAACATGGCCGCCACCAATAACAAcgtgattttaatttgtatttctattttttaacgTTTCTTGTTggttaaaaggaaaatggacAAAATTTGTGTTTCAGACACGGATGGATTTGGAGTAGAAGTGATCTTAAACGAAGAGGACTCCGCAGCAGCGCCATGCTGTGTCCACGGCCCCGCTCTGCTGTTCGtgaagGTGTCGAAAGCCAGACTCTTGGCTCGTGAAGAGGAGAATAAAGCGAAGCAGCCGCCCTTCACACACGAGGAGTTCCGCTCCCGGTTCCTTCAGGTCGTCTCCCTCCCGCTGGCGCAGCGGCGGTTCTGCCAGACCtgccagctgctgctgctccctgCGGACTGGGCTGCCCACTCGGCCCACAGCATCCTGCTCGACGTTAGCGCCGCCCAGCTGCGCCGGCCCAGCCAGCTGCTGCGCCCGCTGGACAACAAGAAGACCAACGCGCAGTACCTGTTCACGGACCGCAGCGGCCACTTCCTGCTGGACCTGTTCGCAGCGCTGGGCTTCCAGAAGGTGCTGTGCCTCGGCACCCCACGCCTCCATGAGCTGATCAAGATCAGGAACTCGGAGGGCAGCGGCCGGGTCATGAAGAGTCTGCTCCTGGACATCGACTACAGGTATTCCCAGTTCTATGGTGAGGAGGAGTTTGGCCATTACAACATGTTCAACCATCACTTTTTCAACGGAAAGGCGGCGGAGAAGCGTCTCGAGGACTTCTTGCATGAGGAGGGGGGGGAGAAGGTGGTGATGGTGACGGATCCTCCCTTCGGTGGCTTGGTACGGCCGCTGGCGCACAGCTTCTCCAAGATCTGCTCCCAGTGGAGGAGCCTGCAGAGCCCCGAAACTCAGGGAGCGGAGCTGCCTATGGTCTGGATATTCCCCTACTTCTTTGAGCCTCGCATCCTGGAGTGTTTTGCCTCGTTTTCTATGCTGGATTATCAGGTGGATTATGACAACCACCCCCTTTACAAGCACGGAGGCAGGGGGCGCAAACAGTCCCCTGTGCGGCTCTTCACCAACCTGAGGCCCAGCAACGTTGTCCTGCCCCCGGAGGAGGGCTACAGGTTTTGTTCCCTCTGCCAGCGATACGTGTCCTCGGGAAACCAGCACTGCCCGCAGTGCGATGCCTGCACGTCCAAGGACGGCAGGGAGTGGAAACATTGCTTTCTGTGCAACAAGTGTGTGAAGCCAACCTGGCTGCACTGCTCGGGCTGCGGTCACTGCGCTCTGGAGGACCACCCCTGCGGCCGGCGGGGGTCCGGCTGCTTCTCCTGCGGCTCCACAGACCACAAGCGCAGGGCCTGTCCGGTATCAAGCGGCGCCGTACGACACCGACCGAGGACTCGGGCGGCCAGGGCAGGGGATGGGAGGAGGCGCAGCGGCGCTGTCCTGCACACGGTCCAGAAGCAGGAGCGCGCTCTGAGAAGACTGACCCAGAAGAGCAAGAAGATGATGAAAAAGAAGACGAAGAGCTCATAGTGCCTCATCGCTCCTCCCACACCAATCGAGCAGCCTGCCCGCTCTGTagacatacatgcatataacacatacatgtctgtgtctgtaccGGTCTGAGCTGCGGCGGCGCAGGAATCGTCCTCTGTGCCTGCGTGTGAAAGATAGACTGgtcatttatatacatttttaactgtaaacacttttaaacttgtatttttctGCAATAAAACCAAAAGTGTGAAGAA

Function

GO:

id name namespace
GO:0046872 metal ion binding molecular_function

KEGG:

id description
K25177 ZCCHC4; rRNA N6-adenosine-methyltransferase ZCCHC4

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018028 True 1736 mRNA 0.57 13 32836631 32847899

Neighbor

gene id symbol gene type direction distance location
AMCG00018029 LOC103388830 coding downstream 17184 32795884 ~ 32819447 (-)
AMCG00018022 LOC106523896,LOC108436153,LOC103388877 coding downstream 60551 32767245 ~ 32776080 (-)
AMCG00018024 NA coding downstream 123008 32694960 ~ 32713623 (-)
AMCG00018025 NA coding downstream 145760 32688381 ~ 32690871 (-)
AMCG00018023 camk2d1,LOC107732596,LOC105907237 coding downstream 152023 32680587 ~ 32684608 (-)
AMCG00018032 NA coding upstream 3905 32851804 ~ 32864532 (-)
AMCG00018031 NA coding upstream 19422 32867321 ~ 32889902 (-)
G94927 NA non-coding downstream 45943 32789779 ~ 32790688 (-)
G94791 NA non-coding downstream 490048 32345250 ~ 32346583 (-)
G94747 NA non-coding downstream 640025 32192183 ~ 32196606 (-)
G94665 NA non-coding downstream 1007831 31828459 ~ 31828800 (-)
G94655 LOC100709447,LOC101481844,LOC102214071,LOC102780160,LOC106514855,LOC108234835 non-coding downstream 1094972 31741224 ~ 31741659 (-)
G94936 NA non-coding upstream 367 32848266 ~ 32848466 (-)
AMCG00018020 LOC105907237,LOC101472930 other downstream 171516 32656030 ~ 32665115 (-)
G94887 NA other downstream 183947 32648464 ~ 32652684 (-)
AMCG00018021 ank2,LOC106577504,LOC106608576 other downstream 230880 32601189 ~ 32605751 (-)
G94835 NA other downstream 380221 32455085 ~ 32456410 (-)
AMCG00018007 NA other downstream 528551 32285485 ~ 32308080 (-)

Expression


Co-expression Network