AMCG00018030 (LOC106609072)


Basic Information

Item Value
gene id AMCG00018030
gene name LOC106609072
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 32975931 ~ 33015403 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018030
ATGCCATGTGAGAGCTGCTTCTGCGGTTGTCTCTCTGGGCAGCAGAGGTCCAGGCTGATGAGCCACAGTGGCCACCTCTCTGTGGACAGGGGAGCTGGGCCCAGACCAAGTGCTGAGGCAGCTGGAGATGACAACAAGCTGACGCTCAAGCCCCGTCTCCAGCGAGGGGGCAGCTCGGCCTCACTGCACAACAGTCTGATGAGGAACAGCATCTTCCAACTGATGATCCACACGCTGGACCCCCTTGCAGAAGAATTTGCTGATTCTGGGAGATTTCGAGAAAAGGCATCCATTCTTCATAAGATTGCCAAAAAGAAATGCCAAGTGGAGGACAGCGAAAAAGTCAACGGTATGGCAAACCGCGCTGACAAAGTCGACCTTCCAAACAGCGCCAATGTAGAAGTGGAGGGAGGTGATGATGGGGATGATGACGATGACCAGCCTCTCAGCCTGGCCTGGCCAGAAACAAACCGCAAGCGCTGCACCTACCTGATCATCATGCCCATCGTCCTCCCGCTGTGGCTCACTCTTCCCGATGTCAGGAAACCAACCTCAAAGAAATTTTTTCCTATCACATTTTTCGGCGCCATCTGCTGGATTGCAGGATTCTCCTATCTCATGGTCTGGTGGGCACATCAGAGTCTGCTTTTAATTCAAGGGATTACAGAAGAGATCATGGGTCTGACCATATTAGCAGCTGGCACCTCCATTCCCGACCTCATCACAAGTGTCATTGTGGCTCGGAAGGGGCTCGGGGACATGGCCGTGTCCAGCTCTGTGGGCAGCAATATCTTTGACATCACTGTTGGACTTCCCCTGCCGTGGCTCCTGTTCTCCTTCATTCACAATATGGCGCCAGTAGCAGTGAGCAGCAATGGGCTGTTCTGCGCAATTGTTCTCCTCTTCCTCATGCTGCTTTTTGTCATCATTTCCATCGCTGTATGCAAGTGGAGGATGAGCAAGATCCTGGGCTTAACCATGTTCCTACTTTACTTTGTATTCCTGGTGGTAAGCGTCATGCTGGAGGACAAAGTCATTGTGTGCCCAGTTTCCATCTGA

Function

NR:

description
PREDICTED: sodium/potassium/calcium exchanger 2-like isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018030 True 1059 mRNA 0.52 11 32975931 33015403

Neighbor

gene id symbol gene type direction distance location
AMCG00018034 NA coding upstream 28125 32946868 ~ 32947806 (+)
AMCG00018033 NA coding upstream 61202 32913321 ~ 32914729 (+)
AMCG00018026 NA coding upstream 130631 32841023 ~ 32845300 (+)
AMCG00018017 NA coding upstream 323247 32607413 ~ 32652684 (+)
AMCG00018018 NA coding upstream 374437 32594172 ~ 32601494 (+)
G94906 NA non-coding upstream 178433 32794755 ~ 32797498 (+)
G94899 NA non-coding upstream 213348 32746824 ~ 32762583 (+)
G94858 NA non-coding upstream 440031 32517123 ~ 32535900 (+)
G94792 NA non-coding upstream 625568 32347462 ~ 32350363 (+)
G94763 slc1a1,LOC107691854,LOC107561518 non-coding upstream 738740 32233771 ~ 32237191 (+)
AMCG00018027 NA other upstream 182327 32789441 ~ 32793604 (+)
G94857 LOC106577504,LOC103385245,LOC108267515 other upstream 374482 32507690 ~ 32601449 (+)
G94838 clcn3,LOC106577864 other upstream 509295 32461298 ~ 32466636 (+)
AMCG00018012 NA other upstream 550696 32407429 ~ 32425235 (+)
AMCG00017978 NA other upstream 2144064 30819869 ~ 30831867 (+)

Expression


Co-expression Network