G89784


Basic Information

Item Value
gene id G89784
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 42802 ~ 43065 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU111984
CCTGAAATTAAGATTCAGATCAGCTTCTCTCCCGCAGTTCTCCAAGCAAATACTAACACAACAATTTCCTGTGCCTTCCTTTGATTCGCCTGATTGCTGCctgatttgtttatatactttaataactcgtttgtaattaaaatgttaatatttttacttaaatagTAGATATCAAATTAACAAATCAAGCGGTGCTTCCTCTtccaaaattgaaatattttgggTTTAATATCCATACCCGGCAGGAGTGCTACTCTAAGGACC

Function

GO:

id name namespace
GO:0002011 morphogenesis of an epithelial sheet biological_process
GO:0055113 epiboly involved in gastrulation with mouth forming second biological_process
GO:0090504 epiboly biological_process
GO:0001702 gastrulation with mouth forming second biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU111984 True 264 lncRNA 0.35 1 42802 43065

Neighbor

gene id symbol gene type direction distance location
AMCG00017385 NA coding downstream 66610 109675 ~ 171747 (+)
AMCG00017389 NA coding downstream 378444 421509 ~ 440294 (+)
AMCG00017390 NA coding downstream 812213 855278 ~ 887994 (+)
AMCG00017392 lbx2,LOC105028271,LOC106604581,LOC106611617 coding downstream 1222377 1265442 ~ 1267334 (+)
AMCG00017399 NA coding downstream 1691367 1734432 ~ 1736022 (+)
G89818 NA non-coding downstream 131985 175050 ~ 176503 (+)
G89819 NA non-coding downstream 134181 177246 ~ 179935 (+)
G89832 NA non-coding downstream 184186 227251 ~ 228724 (+)
G89837 NA non-coding downstream 299550 342615 ~ 402466 (+)
G89896 NA non-coding downstream 702689 745754 ~ 745999 (+)
AMCG00017386 dctn1,LOC101464740 other downstream 4942 48007 ~ 98397 (+)
AMCG00017388 LOC108267694,LOC106608525 other downstream 164521 207586 ~ 211936 (+)
AMCG00017422 leprotl1,LOC103152176 other downstream 2644355 2687420 ~ 2695453 (+)
AMCG00017445 NA other downstream 4549737 4592802 ~ 4606571 (+)
AMCG00017446 NA other downstream 4619560 4662625 ~ 4688223 (+)

Expression


Co-expression Network