G89803


Basic Information

Item Value
gene id G89803
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 166138 ~ 171750 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU112007
cactTCCTTCATAAAGCTTTATTAATTAGATGATTACAGTGCAGTGAGTAATGCCTGTACCAGATCCAAAGTATATAATGTAGTACTTCAGCACATGGGGGGGAAGCTGCAAGTCATGAGTATATAAtttgtgtgcgcgcgtgtgtaTATGCAAAAGGTTTGGCACCCCTGGccaaattacatgttttgtttacacAACCTCTGTAACTTAACGACATATTTctgcaaattaaatgcagttactatttatttgctgaatttaacagattggaaaaaaaattaactgtAAATATGGCAAGTGCAAATGTTTAGGCACCCTCCCAGTTGATCCActaagtgttattttttttttttttaagttcttcAAACTGAATTTATTCGTTAGGCCTTAAATCTAAGTCACAGGGTTCCCAtggaaatcagattttttttttttttccatgactaaattatgtatttgtttagaaCAAAACGGCTGGAAAGTTGGAaatgtacacagaaaataatgaggatATATTGCTAAACAcaataggaaaaaaacacaatcagctTTTGTCATAACAGCCACCTAATTCAcccaatttaataaaacatgctaccatcaactaataaagagtacacaaagtaaatgcaaaattaaacctagTACTATCTGATCAATTTATATgtagtataaatgttaattacagtagAAACTATACAAAACCTTAACAATCTGTATTTTACTGATTTTAGCAGTAATTCTGAACATGGTCAGTTCAGTAATGctccgtttccactggcggacacGTCTGGATTgtatcggaagatataatctcaagtgcctgtgcgatcacgaagaaattgcagttttattagcagcacgtacagaaacaatgactgcttacagttaatatctgagttcattaaacacttggatttcacaggaccggtgcagtgcctgactagttaaaataaactgaaggataataatcggatcggtatCAGCcgatattcttaatattttatgaacaactggccatgtttcaggctgtgttttgcgaatggtgtgcaggacaatctgcagacaatcagtgtgaaggcgaacacgatttagttaacatGATGAATTTgcaagaaaaatgtatgaataaataaatacagcagatctgggtttccctctaaaacataaggactggtttaataaatgcgtccataaacgccatgactgagacgtgcacactttagttcaattaaacctgctatattgtatctggatgattcatcgttaaacgtgtgtattttgtttaaactgtaacttgcccaggttaaggacgtctgataagtaaattataaataatatggcaaaaagtatcgtttgcagttacaaatctgtagtaagagtaataaattaagggagtcacgctgtgccgtttaaaatacatatatactagcacaaatgatgacgataataatagcaatacatatttgctatttagtattattgttgcgcaTGGAAACTTATTCTTATGTgaacgtgcttgtctgaatataatgttgtctacacgtttagctcttcctaatatctctgaacagaaacttatatttattacacggtttaaaatcatgtaaagcacaaataataaaacagacacacaagtcctctccacgtcaggctgtattgctcgtagtgttgttctcggtctctgtttttaaaacaaaagaattcaaacccacagtcgctgctcttctCATCAGAGGGACGaatcacagcggcctggttttgcagaaaaagctctgggacgtgTCTGAGGacggacgcgtccggcacggcacggcacgacacgacgcttaagccagtggaaccgaggcataaggGCCTACAGTAATCCTGTACGCTGCTTTTAGAtgactgctttgttttaaacttgaacGCTTCTGATTAattcattcttaaaaaataaatacataattttcaaCAATAAATTaccagatttttgtatttgaggAGTTTGTATTTTACCAAGCTATTTTTTTCCTGGAACACTGTGTATGATAAtgtgaaaacaacaattaaaacagcatttcatctttttttcacaaaaacattttgatctACAAGAGATCTTCATCAGGAACCATATTCACATGTGTttgctaaaaacctgtgaagcatgggttacataaatacattttatttgtgcattggaGCTGTGGAAAGTGTGcaggtatttctttcttttatatacattttttcataccCTGCACCTACTAAGTAAGTTGCATGTGCGTGTGATTAACTTTTacaattaactttatttcacataaaaggGCGATCATCATTCTGGCAGATCCTGACCAATTTAGTCACGATCGCTTACACGGATTAACATGATGCTACACAGAATCTACACAACTACTGTGAATTTAGTGGCTTAATGGTCAGATTCTGTTCAGAATTACGTACATTTGTAGTACAAGAACACAACCAATTATCTTAGTTTGTCGGAATAGTAGTCCTGCAGAGTACTCCTTGAGAGCTACAGTGGAGAGCAGCACCTTCCCAGCTCAGGCATCCTGcagttttcacacacaaacacgcacataCAGCTGGAGAAAGCAGAGCTTGGCAGGCTGCCTAGGAGACAAGGAGGCGGTGGACCCGATGAAGCTGTGGGTGTGACAGTATGAGCTTGTGGACCTGCTCCTGCCCCCGAGGACAGGGGACCATCACCTTCCCGATGTACACCATGTcagcctccttctcctccttggCCTGGGAAAACAAAGCTCCACTGTGTCACACCATCATACCCATAAAACATGTCTCTGTGCCAAGCGCTGTTGTTATCTTAAGCTGTTTTCACATTACACATTAATCTCAGGTTGAGTGGACCTGGGGTGATTCACTCCTGAGTTTAACCCTGCTTGCATTCACATTTGCCTTGTGCTACTATAAACAGGTTCATCCCAGCTTCAGAGTTTTGTCTCGGGTTGAAAGATGGTTGGTAATGGACTGATTTCTATTCTGAAGAAACATTAAATCTGTGTGATTTTCATTGGTATATTGACTGGTACACAAGCCCAGATAATATACAGTTGGTTCCTTTTTTTCTATGACCTTGGTGTGCTTATTTTTCAGCATtgccaattaaaatattacaacacCTACAAGGGAATATCACATTGCCAGACACTAAATTATTATTGGAATGATAagctaaaacaaaccaaagaacCTTTAAACTATCTAAGCTGTTGATCTTGAAAGTGCATATGTTTTGGAGACACAAGACTACACAAAATGATCCCAACTGGAATTATTGCTAGTacacaacaaagaaaagcattgcagGGGAGATATGAAGGGCACAACATTTCAGATCATTTTATCTTGCTGTAAGGTATTGGCATTGGCATTCTGTCTGTAGGCcttgaagaatccccttttacTTACTGTCAGATGTGACACCAGAAATATATCTTAGCAGCCTGAACACCACAAAGTTTGAAATTAATCTGTATTGAGAAATGTTGACGATGTTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU112007 True 3526 lncRNA 0.38 2 166138 171750

Neighbor

gene id symbol gene type direction distance location
AMCG00017387 NA coding upstream 188705 360455 ~ 470430 (-)
AMCG00017391 NA coding upstream 764131 935881 ~ 936676 (-)
AMCG00017393 pcgf1,LOC107589114,LOC107710472,LOC107660820 coding upstream 1103482 1275232 ~ 1289433 (-)
AMCG00017394 LOC106604596,LOC105028255,LOC106611619,LOC103363938,LOC104951404 coding upstream 1266778 1438528 ~ 1447581 (-)
AMCG00017395 tlx2,LOC106611621,LOC106604594 coding upstream 1383778 1555528 ~ 1561186 (-)
G89870 NA non-coding upstream 213921 385671 ~ 447085 (-)
G89883 NA non-coding upstream 291458 463208 ~ 463423 (-)
G89885 NA non-coding upstream 330417 502167 ~ 528797 (-)
G89892 NA non-coding upstream 461166 632916 ~ 633178 (-)
G89893 NA non-coding upstream 519820 691570 ~ 691851 (-)
G89804 NA other downstream 60253 105685 ~ 105885 (-)
AMCG00017418 NA other upstream 2430033 2601783 ~ 2615562 (-)
AMCG00017426 NA other upstream 2539552 2711302 ~ 2841894 (-)
G90400 NA other upstream 4371025 4542775 ~ 4544760 (-)
G90501 NA other upstream 4986634 5158384 ~ 5221021 (-)
G90502 NA other upstream 5050723 5222473 ~ 5223047 (-)

Expression


Co-expression Network