G89819


Basic Information

Item Value
gene id G89819
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 177246 ~ 179935 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU112024
agtgtaattttaattgtagaTACAACAGTCAAGTGGGCAGTGCTTGAGACATAAAAATCTAAACCAATATCACAAAAGCACCAATGTTTTTTCATTCCAAACCAGAAGGCCTGTTTGGGAACTGTACACATGATTTTAGAATCTCCACCTCCATTACAAGTATAGTGTGATGCAATATTACcccagaataacaaaaatatcaGATTATTAGGCATAGCACAATGAAGGAGAAAACttgctttatgtatttttttattattcatttttagaaaAGCCTGCTTTTTACAGGGTTTATGCAGCAGATTCAGGGCTTGACTTTAAATGCTATATGCaggcataaataaatagaaagtcaatgtttttttttactctttccAAATGCAAGCTTAAATTGATTGATTACTAGTCAGCTCAATacccatttttatttccatcctAAACATGGAATGCTGcacattgatttatatatagtaaaacCTCTCTCATCATCTCTGTTGTGTCACCAAATCAACCCAGTAGTTATTAATCTACATTGCTGAATGGTTCAGAATACAACTGTTTCCAAGGCACACAtaagtataaaacaaatgaccAACTGAACCAATTTGAATCCCATCAGAATGTAAATTAACCATGCTATTCCAAGTGATCTTCCATGATATTCAATGAGACTATGAGAATCATAGCACATAATTATAGTCCATTATGTCTGTCCACAGCTGTCCCTGTCCCCATATCACAGGCTAATTTAACAGCATTGCAGAGATTATAGGAAgtgattgtttttgtattagcATGCTTAGAAATTGTCATTCAGTCTCAGttggttctctctctctaatgtgTCTGAGAatgtaatataacatttatatttcttaattgGCTAAACACCCATTGGAAAAGAGATAAGTAGAAAGTCTGTTGATCGTATTTCACATACCTAAAGTTTCCcgtaaaacatataaaatactgtTGCTTTCCAATAATGTAAATTTCACacagaaatgaagaaataaaagtaCTTGAACTTAAAATACATGTGCTGGTACAgtgtcatttaaatacatgttaaaaattAAGAGTACCTAATGACCCATTTTGCTCTTTAGATTGCGAAAACAAGGTATTATGATGGAAACAGAATATACGAATGCCTTgtggaaaattgaaaaaaaaaaaaaaaaaaaactgaaataattaccAGCAGGCAAATGTCTGATGGGTGACAGGATtccaaatattaataataaataaaactaaacgtAATATATCAACATACACTGGTTTATAGTGAGTAATGCAGCTAAGATGAGTGAGCACAGCTAAACAGTGGTCTGACAAGTCGTAtaagtgaattaaaaacattgtgtgcTTCTGAAATTTGTTTAATACAGTATGAGGATAACTTATACTATAGGATGTGTCAGCTATGGTTCAAATGGCTAGTTATTTTTCTCAGATTTATATGGGTTTAAGTCTGCATTAACCATTGGATTTACACTCAATGCAATGTTCCTTAGTTTGCAAAGGTGCAGATTCAAGATTCAAGATTCAAGGTGCAGGTTCAAGTAGCATTGTGTAATGTTACACCTCCTGGAGTTATATTATCTTAAAGTCACATAATTCAATTTTATCATACTGAGTCTTAAAGTTTAAGTGGCAACTGTATTAGGGGCAGTACTCAGTTCACATGCAAGACAGTACAATTCAATGTCTGGACATCTTTTTGGAACTGGAAACGAAAACATTATGTACATAGTCAGTGTTACATTCACAGTGtttccacagaagaactgttaGATCAGTTATGAATTTTAGACTGTCTTAATAGAAAGGTCCTCTTAAAAGTATGGTCACTGAGTTTTTCCTTTGATTAATGCACTGAGGACAGCCATATTACATGTCAACCATTAATGCAGCTATGCAAATTAATCTCtggtgcttaaaaaaaacatatttccatttCAGCATGGATGACAAGTCCAGGTTTCaaagaagcaaaaaacaaacaagcaaactaaAAACTCTGTTAAGGAACACAGGAAGCCAGTATTTGTAACGTTTTTGATATATGCACATTACTAAAAGGTATTTCTTAGAAACCCAAGATGTTAAGGACACCCACTCACTGTAAACCTGGATATGGCTTTATGTTATTCAAATATGAGGTTATGTAATGTAAACACAGGAGACAAATGGGATTTCACCAAACCATTTTAAACCTAGTACAGTAACAAATCGAGCatgaacaaaaaactaaaaaaataacagcaacagcaacaactcTTTGGCACATGATGCAttcaacaaaaaactaaaatacaaatgcttgTAGTACACATGACTGGTGCACAGACCCATTTGAGACAGTGAATTTTGATGGCACAGCTATCCTCTTTACTGGGAGTCTCAGTTTGCTTTCTTCATTGCACAACCGCGTCATCTTATATGGAGAGAAGAGAGATTGCTGGCCTTCAAGTAGGGTCCCCCAGACATATTTTCAGCTCATACAGGTTCCCCTCTCAGCAGTGAACAGCTGGCAGCCCCTAGTGGCACTAGATGTGCTGTTTTATAGTGCAAATTGTCTGTTAGCAGTCCCAACAGATTTTCTCCAAGGGTCATTTTCGAAAAGGGGGCAAGGCTATGTTGGGTTTCACCCCTGGTACAGg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU112024 True 2669 lncRNA 0.35 2 177246 179935

Neighbor

gene id symbol gene type direction distance location
AMCG00017385 NA coding upstream 5499 109675 ~ 171747 (+)
AMCG00017389 NA coding downstream 241574 421509 ~ 440294 (+)
AMCG00017390 NA coding downstream 675343 855278 ~ 887994 (+)
AMCG00017392 lbx2,LOC105028271,LOC106604581,LOC106611617 coding downstream 1085507 1265442 ~ 1267334 (+)
AMCG00017399 NA coding downstream 1554497 1734432 ~ 1736022 (+)
AMCG00017398 NA coding downstream 1578451 1758386 ~ 1768848 (+)
G89818 NA non-coding upstream 743 175050 ~ 176503 (+)
G89784 NA non-coding upstream 134181 42802 ~ 43065 (+)
G89832 NA non-coding downstream 47316 227251 ~ 228724 (+)
G89837 NA non-coding downstream 162680 342615 ~ 402466 (+)
G89896 NA non-coding downstream 565819 745754 ~ 745999 (+)
G89898 NA non-coding downstream 697976 877911 ~ 878653 (+)
G89901 NA non-coding downstream 735068 915003 ~ 915213 (+)
AMCG00017386 dctn1,LOC101464740 other upstream 78849 48007 ~ 98397 (+)
AMCG00017388 LOC108267694,LOC106608525 other downstream 27651 207586 ~ 211936 (+)
AMCG00017422 leprotl1,LOC103152176 other downstream 2507485 2687420 ~ 2695453 (+)
AMCG00017445 NA other downstream 4412867 4592802 ~ 4606571 (+)
AMCG00017446 NA other downstream 4482690 4662625 ~ 4688223 (+)
AMCG00017486 NA other downstream 6549803 6729738 ~ 7188643 (+)

Expression


Co-expression Network