G89885


Basic Information

Item Value
gene id G89885
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 502167 ~ 528797 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU112110
gtcaaggactctgctgttttgacttcggtgggcaggtcgttccaccacttaggggccagggatgagaaggagcaggctctggaggaaggagagtggagaggaggcagagttagccttctggcactggaggagcgcagtggtctggaggggatgtatggagagatgagtgactgaaggtagcttggtgcagtgtggtcaagacagcggtaggt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU112110 True 212 lncRNA 0.57 2 502167 528797

Neighbor

gene id symbol gene type direction distance location
AMCG00017387 NA coding downstream 31737 360455 ~ 470430 (-)
AMCG00017391 NA coding upstream 407084 935881 ~ 936676 (-)
AMCG00017393 pcgf1,LOC107589114,LOC107710472,LOC107660820 coding upstream 746435 1275232 ~ 1289433 (-)
AMCG00017394 LOC106604596,LOC105028255,LOC106611619,LOC103363938,LOC104951404 coding upstream 909731 1438528 ~ 1447581 (-)
AMCG00017395 tlx2,LOC106611621,LOC106604594 coding upstream 1026731 1555528 ~ 1561186 (-)
AMCG00017396 NA coding upstream 1070791 1599588 ~ 1600290 (-)
G89883 NA non-coding downstream 38744 463208 ~ 463423 (-)
G89870 NA non-coding downstream 55082 385671 ~ 447085 (-)
G89803 NA non-coding downstream 330417 166138 ~ 171750 (-)
G89892 NA non-coding upstream 104119 632916 ~ 633178 (-)
G89893 NA non-coding upstream 162773 691570 ~ 691851 (-)
G89895 NA non-coding upstream 192504 721301 ~ 721711 (-)
G89900 NA non-coding upstream 382599 911396 ~ 911648 (-)
G89909 nanos1,nano1,LOC105894108,LOC106611616 non-coding upstream 439746 968543 ~ 971428 (-)
AMCG00017384 LOC106911887,LOC104963986 other downstream 150381 160054 ~ 351786 (-)
G89804 NA other downstream 396282 105685 ~ 105885 (-)
AMCG00017418 NA other upstream 2072986 2601783 ~ 2615562 (-)
AMCG00017426 NA other upstream 2182505 2711302 ~ 2841894 (-)
G90400 NA other upstream 4013978 4542775 ~ 4544760 (-)
G90501 NA other upstream 4629587 5158384 ~ 5221021 (-)
G90502 NA other upstream 4693676 5222473 ~ 5223047 (-)

Expression


Co-expression Network