Gene
RNA
| Item | Value |
|---|---|
| gene id | G89895 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030131.1 |
| NCBI id | CM030131.1 |
| chromosome length | 33043351 |
| location | 721301 ~ 721711 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| description |
|---|
| protein S100-A1 isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU112120 | True | 411 | lncRNA | 0.38 | 1 | 721301 | 721711 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00017387 | NA | coding | downstream | 250871 | 360455 ~ 470430 (-) |
| AMCG00017391 | NA | coding | upstream | 214170 | 935881 ~ 936676 (-) |
| AMCG00017393 | pcgf1,LOC107589114,LOC107710472,LOC107660820 | coding | upstream | 553521 | 1275232 ~ 1289433 (-) |
| AMCG00017394 | LOC106604596,LOC105028255,LOC106611619,LOC103363938,LOC104951404 | coding | upstream | 716817 | 1438528 ~ 1447581 (-) |
| AMCG00017395 | tlx2,LOC106611621,LOC106604594 | coding | upstream | 833817 | 1555528 ~ 1561186 (-) |
| AMCG00017396 | NA | coding | upstream | 877877 | 1599588 ~ 1600290 (-) |
| G89893 | NA | non-coding | downstream | 29450 | 691570 ~ 691851 (-) |
| G89892 | NA | non-coding | downstream | 88123 | 632916 ~ 633178 (-) |
| G89885 | NA | non-coding | downstream | 192504 | 502167 ~ 528797 (-) |
| G89883 | NA | non-coding | downstream | 257878 | 463208 ~ 463423 (-) |
| G89870 | NA | non-coding | downstream | 274216 | 385671 ~ 447085 (-) |
| G89900 | NA | non-coding | upstream | 189685 | 911396 ~ 911648 (-) |
| G89909 | nanos1,nano1,LOC105894108,LOC106611616 | non-coding | upstream | 246832 | 968543 ~ 971428 (-) |
| G89912 | NA | non-coding | upstream | 317561 | 1039272 ~ 1039471 (-) |
| G89939 | NA | non-coding | upstream | 619161 | 1340872 ~ 1341089 (-) |
| G89940 | NA | non-coding | upstream | 636973 | 1358684 ~ 1358981 (-) |
| AMCG00017384 | LOC106911887,LOC104963986 | other | downstream | 369515 | 160054 ~ 351786 (-) |
| G89804 | NA | other | downstream | 615416 | 105685 ~ 105885 (-) |
| AMCG00017418 | NA | other | upstream | 1880072 | 2601783 ~ 2615562 (-) |
| AMCG00017426 | NA | other | upstream | 1989591 | 2711302 ~ 2841894 (-) |
| G90400 | NA | other | upstream | 3821064 | 4542775 ~ 4544760 (-) |
| G90501 | NA | other | upstream | 4436673 | 5158384 ~ 5221021 (-) |
| G90502 | NA | other | upstream | 4500762 | 5222473 ~ 5223047 (-) |
