G89912


Basic Information

Item Value
gene id G89912
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 1039272 ~ 1039471 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU112138
ttgagtcttaagaaacttgacccatggaaacgaacagggccctgctttcctcaaagactttgtcttcaagtaactacggtggaaaatcctgcttgcaaagaagattttgtgcacaaccttggagccttcaaaccagtggaaaatctgtttggaaaagactctacattcgcgaaaccccaacttccaggtgcatcgactga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU112138 True 200 lncRNA 0.44 1 1039272 1039471

Neighbor

gene id symbol gene type direction distance location
AMCG00017391 NA coding downstream 102596 935881 ~ 936676 (-)
AMCG00017387 NA coding downstream 568842 360455 ~ 470430 (-)
AMCG00017393 pcgf1,LOC107589114,LOC107710472,LOC107660820 coding upstream 235761 1275232 ~ 1289433 (-)
AMCG00017394 LOC106604596,LOC105028255,LOC106611619,LOC103363938,LOC104951404 coding upstream 399057 1438528 ~ 1447581 (-)
AMCG00017395 tlx2,LOC106611621,LOC106604594 coding upstream 516057 1555528 ~ 1561186 (-)
AMCG00017396 NA coding upstream 560117 1599588 ~ 1600290 (-)
AMCG00017397 NA coding upstream 561120 1600591 ~ 1601058 (-)
G89909 nanos1,nano1,LOC105894108,LOC106611616 non-coding downstream 67844 968543 ~ 971428 (-)
G89900 NA non-coding downstream 127624 911396 ~ 911648 (-)
G89895 NA non-coding downstream 317561 721301 ~ 721711 (-)
G89893 NA non-coding downstream 347421 691570 ~ 691851 (-)
G89892 NA non-coding downstream 406094 632916 ~ 633178 (-)
G89939 NA non-coding upstream 301401 1340872 ~ 1341089 (-)
G89940 NA non-coding upstream 319213 1358684 ~ 1358981 (-)
G90017 NA non-coding upstream 788209 1827680 ~ 1831528 (-)
G90066 LOC107678491 non-coding upstream 885737 1925208 ~ 1926851 (-)
G90093 NA non-coding upstream 1015368 2054839 ~ 2055363 (-)
AMCG00017384 LOC106911887,LOC104963986 other downstream 687486 160054 ~ 351786 (-)
G89804 NA other downstream 933387 105685 ~ 105885 (-)
AMCG00017418 NA other upstream 1562312 2601783 ~ 2615562 (-)
AMCG00017426 NA other upstream 1671831 2711302 ~ 2841894 (-)
G90400 NA other upstream 3503304 4542775 ~ 4544760 (-)
G90501 NA other upstream 4118913 5158384 ~ 5221021 (-)
G90502 NA other upstream 4183002 5222473 ~ 5223047 (-)

Expression


Co-expression Network