G90017


Basic Information

Item Value
gene id G90017
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 1827680 ~ 1831528 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU112257
attttcatcataataGAAATTGTTTGCTTCATCATGAGAaAAGTATATACAAGTTGCCACAAACAGAcccaggacagtacagGTTTACAAACTCAAACAGCAGAGATGCAGAAAGAAATGGATGCACTGGAAAACTGACACCAAAATCACTTGGAGAAAGGAAATGTCTGCAGTTCTGAGCATGGAAACGACAGCTGCTCTTTCTCTATTTGCCATGaggctgaaatgtttttcatttcaataggGGATGTTTGAACTATGGGTAGTAtggtggtgcagtggttagcactgctgccttaAATTCCGGCCTTGGTTGTCTgggg

Function

GO:

id name namespace
GO:0045202 synapse cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU112257 True 323 lncRNA 0.41 3 1827680 1831528

Neighbor

gene id symbol gene type direction distance location
AMCG00017401 NA coding downstream 46472 1771413 ~ 1781208 (-)
AMCG00017400 NA coding downstream 120403 1704946 ~ 1707277 (-)
AMCG00017397 NA coding downstream 226622 1600591 ~ 1601058 (-)
AMCG00017396 NA coding downstream 227390 1599588 ~ 1600290 (-)
AMCG00017395 tlx2,LOC106611621,LOC106604594 coding downstream 266494 1555528 ~ 1561186 (-)
AMCG00017409 loxl3,LOC106612874 coding upstream 105594 1937122 ~ 1946925 (-)
AMCG00017410 NA coding upstream 116632 1948160 ~ 1964564 (-)
AMCG00017407 loxl3,LOC108441751 coding upstream 154093 1985621 ~ 1993541 (-)
AMCG00017408 pank2,LOC107391889,LOC107103406,LOC101161204 coding upstream 174231 2005759 ~ 2015562 (-)
AMCG00017406 NA coding upstream 191904 2023432 ~ 2032216 (-)
G89940 NA non-coding downstream 468699 1358684 ~ 1358981 (-)
G89939 NA non-coding downstream 486591 1340872 ~ 1341089 (-)
G89912 NA non-coding downstream 788209 1039272 ~ 1039471 (-)
G89909 nanos1,nano1,LOC105894108,LOC106611616 non-coding downstream 856252 968543 ~ 971428 (-)
G89900 NA non-coding downstream 916032 911396 ~ 911648 (-)
G90066 LOC107678491 non-coding upstream 93680 1925208 ~ 1926851 (-)
G90093 NA non-coding upstream 223311 2054839 ~ 2055363 (-)
G90098 NA non-coding upstream 247512 2079040 ~ 2079244 (-)
G90129 NA non-coding upstream 353857 2185385 ~ 2185739 (-)
G90139 NA non-coding upstream 453697 2285225 ~ 2285529 (-)
AMCG00017384 LOC106911887,LOC104963986 other downstream 1475894 160054 ~ 351786 (-)
G89804 NA other downstream 1721795 105685 ~ 105885 (-)
AMCG00017418 NA other upstream 770255 2601783 ~ 2615562 (-)
AMCG00017426 NA other upstream 879774 2711302 ~ 2841894 (-)
G90400 NA other upstream 2711247 4542775 ~ 4544760 (-)
G90501 NA other upstream 3326856 5158384 ~ 5221021 (-)
G90502 NA other upstream 3390945 5222473 ~ 5223047 (-)

Expression


Co-expression Network