G90093



Basic Information


Item Value
gene id G90093
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 2054839 ~ 2055363 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>TU112352
gttttgaatgccttgaagcccaatttccatttgtgtccccaggtgcgcatgtccctgctgatctggaaaggctcctctggtttgatgtggtcgatgcctttcatgattttgaagacttggatcaagtccccacgtagtctcctctgttccagggtgaaaaggttcagttccctcagtctctccgaggaggacattcccttcagacctggaataagtctggttgctctcctctgaactgcctctagagcagcaatatccttcttgaagtgtggtgcccagaactgtacacagtattccagatgaggtctaactagtgcattgtacagtctgaacattacttcccttgttttaaattctacacttttgacaatatacactaacatcctgtttgactttttttattgcttccccacactgtttggatggagaaagtgaggagtccacatagactcctatgTCTTTCTGATGCgatacttaatctagttctattcctcccatagtgtaattataatggacatttttgtt

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU112352 True 525 lncRNA 0.43 1 2054839 2055363

Neighbor


gene id symbol gene type direction distance location
AMCG00017406 NA coding downstream 22623 2023432 ~ 2032216 (-)
AMCG00017408 pank2,LOC107391889,LOC107103406,LOC101161204 coding downstream 39277 2005759 ~ 2015562 (-)
AMCG00017407 loxl3,LOC108441751 coding downstream 61298 1985621 ~ 1993541 (-)
AMCG00017410 NA coding downstream 90275 1948160 ~ 1964564 (-)
AMCG00017409 loxl3,LOC106612874 coding downstream 107914 1937122 ~ 1946925 (-)
AMCG00017414 NA coding upstream 20815 2076178 ~ 2427127 (-)
AMCG00017417 letm1 coding upstream 473552 2528915 ~ 2566277 (-)
AMCG00017425 NA coding upstream 786559 2841922 ~ 3087650 (-)
AMCG00017430 ctnna2 coding upstream 1374258 3429621 ~ 3487525 (-)
AMCG00017431 ctnna2,LOC102793143,LOC107706127,LOC103137875 coding upstream 1474320 3529683 ~ 3539396 (-)
G90066 LOC107678491 non-coding downstream 127988 1925208 ~ 1926851 (-)
G90017 NA non-coding downstream 223311 1827680 ~ 1831528 (-)
G89940 NA non-coding downstream 695858 1358684 ~ 1358981 (-)
G89939 NA non-coding downstream 713750 1340872 ~ 1341089 (-)
G89912 NA non-coding downstream 1015368 1039272 ~ 1039471 (-)
G90098 NA non-coding upstream 23677 2079040 ~ 2079244 (-)
G90129 NA non-coding upstream 130022 2185385 ~ 2185739 (-)
G90139 NA non-coding upstream 229862 2285225 ~ 2285529 (-)
G90157 NA non-coding upstream 317747 2373110 ~ 2464259 (-)
G90221 suclg1,LOC107746879 non-coding upstream 666063 2721426 ~ 2722298 (-)
AMCG00017384 LOC106911887,LOC104963986 other downstream 1703053 160054 ~ 351786 (-)
G89804 NA other downstream 1948954 105685 ~ 105885 (-)
AMCG00017418 NA other upstream 546420 2601783 ~ 2615562 (-)
AMCG00017426 NA other upstream 655939 2711302 ~ 2841894 (-)
G90400 NA other upstream 2487412 4542775 ~ 4544760 (-)
G90501 NA other upstream 3103021 5158384 ~ 5221021 (-)
G90502 NA other upstream 3167110 5222473 ~ 5223047 (-)

Expression



Co-expression Network