G90157


Basic Information

Item Value
gene id G90157
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 2373110 ~ 2464259 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU112428
gcgttttgtttagtgtttatttAACTCTTCTGACAGCAAAGTTTTTCAGGCACAGAGAatgatatgaaaataaagaaaaaaaaatttttCTCACCAAACTGAAGTTATGCACTTCTGTGGAATGTGTCATAACATCGCACTCAAAGTTTTATGCAGATGTTTAAATGCTGCAAACAACAGtaatgaaaattacaaaaacactgtaTACGAAAAgttatgtttgcttttctacaacatcttgtaaaaaaaaaaaaaagaaacaaaacaaaaaataaattatatagatATCTAGTTGAATTCTTTCAAAAACCTGCACAAATATGCAATTTCatctctttttaaaacattggaAACAGGTACATGGAATGGATTTTGTAAGAAAATATTGTAACGAAAATCTTTTGTTtctataattttacaaaaaaaaaaaaaatcacacagcTATATAAAATCTACTCAATGTACAACAATCACTTATGTAACTTCAaactataaattattattttttttctatttagtaAGAGCTTCATGGCACtaataaaatactttcaaaaacaaacaaaaaataaacagagaaaaaggTTGTTATCCCAGTATTGCTAAGTGTACAAActtggaaaattaaaacaaaaataaaaataataaaacaaaaacaacagcacacacaaGGGTGAACTGATTATCTTATTGCGCTACTGTGAACTGACTGGCACTTTACTTTGTAGTGGGTTCAAAAATTGACACCTGGATTATAAAGCACTGCCTAATTAAATCCAGGGATGCCCAAATCTCTCTTTAGGTCAAAGGTAGCCATGCAGGCTATTAAACTGGACCTCTGTTTAAAGAGCTGTCAGATATTAATTATCACAAAATATTCTGTGATGGACTCAactaaatgatttattttctttgaaaggaGTCATTTTCTTGCTTGTTTATACAACTGGATTGATAGGTCAACAGTGCACATCTTCACAATTCATGTATAATGTGTAAAGCTGTTCAATACAAATGAATAGAAGAGCTACCACCTCAGCCCCAGCCTTTGTGGGGTGTTAAATCTCTATACGTTCTGGtatcaagaaaaagaaagggttGGGCACCCCTACTTCGGCCACAAATGACACAATCAAAGTGAATCAGCAGGATGCAAGAGTTCCGATACTGACAAAGGAACATtcaaccctagaaatggttctAAACAAGCAGGGTAGAAAATTACCTAAAAAGAAAAGACTGTACTACACATTCTCTGAAGTGACAGCTGGTTACTAAAGAGGGAAAACTGAAGGAATAAAAAATACTCTCACCATAGGGAAAGCTTTTACCCttcttcaaaaatatatatatttgtatagcaGACCAAGATTACACAAGAGAAGTGCcctacagttgctttttctt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU112428 True 1404 lncRNA 0.32 2 2373110 2464259

Neighbor

gene id symbol gene type direction distance location
AMCG00017406 NA coding downstream 340894 2023432 ~ 2032216 (-)
AMCG00017408 pank2,LOC107391889,LOC107103406,LOC101161204 coding downstream 357548 2005759 ~ 2015562 (-)
AMCG00017407 loxl3,LOC108441751 coding downstream 379569 1985621 ~ 1993541 (-)
AMCG00017410 NA coding downstream 408546 1948160 ~ 1964564 (-)
AMCG00017409 loxl3,LOC106612874 coding downstream 426185 1937122 ~ 1946925 (-)
AMCG00017417 letm1 coding upstream 64656 2528915 ~ 2566277 (-)
AMCG00017425 NA coding upstream 377663 2841922 ~ 3087650 (-)
AMCG00017430 ctnna2 coding upstream 965362 3429621 ~ 3487525 (-)
AMCG00017431 ctnna2,LOC102793143,LOC107706127,LOC103137875 coding upstream 1065424 3529683 ~ 3539396 (-)
AMCG00017434 ctnna2,ctnna1,LOC107594905,LOC107750356 coding upstream 1273554 3737813 ~ 3747843 (-)
G90139 NA non-coding downstream 87581 2285225 ~ 2285529 (-)
G90129 NA non-coding downstream 187371 2185385 ~ 2185739 (-)
G90098 NA non-coding downstream 293866 2079040 ~ 2079244 (-)
G90093 NA non-coding downstream 317747 2054839 ~ 2055363 (-)
G90066 LOC107678491 non-coding downstream 446259 1925208 ~ 1926851 (-)
G90221 suclg1,LOC107746879 non-coding upstream 257167 2721426 ~ 2722298 (-)
G90226 NA non-coding upstream 372260 2836519 ~ 2836798 (-)
G90243 NA non-coding upstream 474991 2939250 ~ 2939477 (-)
G90244 NA non-coding upstream 475676 2939935 ~ 2940143 (-)
G90252 NA non-coding upstream 890806 3355065 ~ 3355489 (-)
AMCG00017384 LOC106911887,LOC104963986 other downstream 2021324 160054 ~ 351786 (-)
G89804 NA other downstream 2267225 105685 ~ 105885 (-)
AMCG00017418 NA other upstream 137524 2601783 ~ 2615562 (-)
AMCG00017426 NA other upstream 247043 2711302 ~ 2841894 (-)
G90400 NA other upstream 2078516 4542775 ~ 4544760 (-)
G90501 NA other upstream 2694125 5158384 ~ 5221021 (-)
G90502 NA other upstream 2758214 5222473 ~ 5223047 (-)

Expression


Co-expression Network