G90226


Basic Information

Item Value
gene id G90226
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 2836519 ~ 2836798 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU112509
ggcaggtcgttccaccatttaggggccaaggatgagaaggagcggctctggaggaaggagagtggagaggaggcagagttagtcttctggcactggaggagcgcagtggtctggaggggatgtatggagagatgagtgtctgaaggtagcttggtgcagtgtggtcgagacagcgataggtgagggtcaaagtcttgaactgaagccgtgccgctatcgggagccagtggagggagcggagcagtggagtagcgtgtgaatcagggcagagagacaccag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU112509 True 280 lncRNA 0.58 1 2836519 2836798

Neighbor

gene id symbol gene type direction distance location
AMCG00017417 letm1 coding downstream 270242 2528915 ~ 2566277 (-)
AMCG00017414 NA coding downstream 409392 2076178 ~ 2427127 (-)
AMCG00017406 NA coding downstream 804303 2023432 ~ 2032216 (-)
AMCG00017408 pank2,LOC107391889,LOC107103406,LOC101161204 coding downstream 820957 2005759 ~ 2015562 (-)
AMCG00017407 loxl3,LOC108441751 coding downstream 842978 1985621 ~ 1993541 (-)
AMCG00017425 NA coding upstream 5124 2841922 ~ 3087650 (-)
AMCG00017430 ctnna2 coding upstream 592823 3429621 ~ 3487525 (-)
AMCG00017431 ctnna2,LOC102793143,LOC107706127,LOC103137875 coding upstream 692885 3529683 ~ 3539396 (-)
AMCG00017434 ctnna2,ctnna1,LOC107594905,LOC107750356 coding upstream 901015 3737813 ~ 3747843 (-)
AMCG00017432 ctnna2,LOC107552348,LOC103137937,LOC107706127 coding upstream 939696 3776494 ~ 3799472 (-)
G90221 suclg1,LOC107746879 non-coding downstream 114221 2721426 ~ 2722298 (-)
G90157 NA non-coding downstream 372260 2373110 ~ 2464259 (-)
G90139 NA non-coding downstream 550990 2285225 ~ 2285529 (-)
G90129 NA non-coding downstream 650780 2185385 ~ 2185739 (-)
G90098 NA non-coding downstream 757275 2079040 ~ 2079244 (-)
G90243 NA non-coding upstream 102452 2939250 ~ 2939477 (-)
G90244 NA non-coding upstream 103137 2939935 ~ 2940143 (-)
G90252 NA non-coding upstream 518267 3355065 ~ 3355489 (-)
G90255 LOC100846954 non-coding upstream 567688 3404486 ~ 3404766 (-)
G90281 NA non-coding upstream 835497 3672295 ~ 3685214 (-)
AMCG00017418 NA other downstream 220957 2601783 ~ 2615562 (-)
AMCG00017384 LOC106911887,LOC104963986 other downstream 2484733 160054 ~ 351786 (-)
G89804 NA other downstream 2730634 105685 ~ 105885 (-)
G90400 NA other upstream 1705977 4542775 ~ 4544760 (-)
G90501 NA other upstream 2321586 5158384 ~ 5221021 (-)
G90502 NA other upstream 2385675 5222473 ~ 5223047 (-)
G90715 fat4,LOC106611628,LOC106604622 other upstream 3550454 6387252 ~ 6389038 (-)
G90746 NA other upstream 3896437 6733235 ~ 7188648 (-)

Expression


Co-expression Network